Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22323 | 67192;67193;67194 | chr2:178580412;178580411;178580410 | chr2:179445139;179445138;179445137 |
N2AB | 20682 | 62269;62270;62271 | chr2:178580412;178580411;178580410 | chr2:179445139;179445138;179445137 |
N2A | 19755 | 59488;59489;59490 | chr2:178580412;178580411;178580410 | chr2:179445139;179445138;179445137 |
N2B | 13258 | 39997;39998;39999 | chr2:178580412;178580411;178580410 | chr2:179445139;179445138;179445137 |
Novex-1 | 13383 | 40372;40373;40374 | chr2:178580412;178580411;178580410 | chr2:179445139;179445138;179445137 |
Novex-2 | 13450 | 40573;40574;40575 | chr2:178580412;178580411;178580410 | chr2:179445139;179445138;179445137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | None | N | 0.335 | 0.302 | 0.414930877219 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31254E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2969 | likely_benign | 0.3538 | ambiguous | -0.438 | Destabilizing | 0.016 | N | 0.36 | neutral | None | None | None | None | I |
N/C | 0.4363 | ambiguous | 0.4817 | ambiguous | 0.419 | Stabilizing | 0.864 | D | 0.415 | neutral | None | None | None | None | I |
N/D | 0.1609 | likely_benign | 0.1802 | benign | -0.362 | Destabilizing | None | N | 0.121 | neutral | N | 0.460750289 | None | None | I |
N/E | 0.3794 | ambiguous | 0.4592 | ambiguous | -0.395 | Destabilizing | 0.001 | N | 0.148 | neutral | None | None | None | None | I |
N/F | 0.6188 | likely_pathogenic | 0.6711 | pathogenic | -0.82 | Destabilizing | 0.214 | N | 0.434 | neutral | None | None | None | None | I |
N/G | 0.3588 | ambiguous | 0.4022 | ambiguous | -0.616 | Destabilizing | 0.031 | N | 0.277 | neutral | None | None | None | None | I |
N/H | 0.1638 | likely_benign | 0.173 | benign | -0.727 | Destabilizing | 0.295 | N | 0.355 | neutral | N | 0.469636221 | None | None | I |
N/I | 0.3771 | ambiguous | 0.4264 | ambiguous | -0.05 | Destabilizing | None | N | 0.335 | neutral | N | 0.485627336 | None | None | I |
N/K | 0.2734 | likely_benign | 0.3865 | ambiguous | 0.124 | Stabilizing | None | N | 0.195 | neutral | N | 0.448783856 | None | None | I |
N/L | 0.3563 | ambiguous | 0.4269 | ambiguous | -0.05 | Destabilizing | 0.013 | N | 0.417 | neutral | None | None | None | None | I |
N/M | 0.3581 | ambiguous | 0.4151 | ambiguous | 0.608 | Stabilizing | 0.214 | N | 0.398 | neutral | None | None | None | None | I |
N/P | 0.8482 | likely_pathogenic | 0.8873 | pathogenic | -0.154 | Destabilizing | 0.356 | N | 0.414 | neutral | None | None | None | None | I |
N/Q | 0.3421 | ambiguous | 0.4046 | ambiguous | -0.48 | Destabilizing | 0.038 | N | 0.333 | neutral | None | None | None | None | I |
N/R | 0.3841 | ambiguous | 0.4893 | ambiguous | 0.27 | Stabilizing | 0.038 | N | 0.31 | neutral | None | None | None | None | I |
N/S | 0.1458 | likely_benign | 0.1564 | benign | -0.133 | Destabilizing | 0.012 | N | 0.307 | neutral | N | 0.503829062 | None | None | I |
N/T | 0.1872 | likely_benign | 0.2249 | benign | -0.03 | Destabilizing | 0.055 | N | 0.246 | neutral | N | 0.459925757 | None | None | I |
N/V | 0.3539 | ambiguous | 0.4042 | ambiguous | -0.154 | Destabilizing | 0.013 | N | 0.418 | neutral | None | None | None | None | I |
N/W | 0.8321 | likely_pathogenic | 0.8589 | pathogenic | -0.745 | Destabilizing | 0.864 | D | 0.525 | neutral | None | None | None | None | I |
N/Y | 0.1871 | likely_benign | 0.2203 | benign | -0.478 | Destabilizing | 0.295 | N | 0.405 | neutral | N | 0.478536991 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.