Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22325 | 67198;67199;67200 | chr2:178580406;178580405;178580404 | chr2:179445133;179445132;179445131 |
N2AB | 20684 | 62275;62276;62277 | chr2:178580406;178580405;178580404 | chr2:179445133;179445132;179445131 |
N2A | 19757 | 59494;59495;59496 | chr2:178580406;178580405;178580404 | chr2:179445133;179445132;179445131 |
N2B | 13260 | 40003;40004;40005 | chr2:178580406;178580405;178580404 | chr2:179445133;179445132;179445131 |
Novex-1 | 13385 | 40378;40379;40380 | chr2:178580406;178580405;178580404 | chr2:179445133;179445132;179445131 |
Novex-2 | 13452 | 40579;40580;40581 | chr2:178580406;178580405;178580404 | chr2:179445133;179445132;179445131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.919 | N | 0.432 | 0.303 | 0.247322355667 | gnomAD-4.0.0 | 1.5924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77886E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7113 | likely_pathogenic | 0.7365 | pathogenic | -0.83 | Destabilizing | 0.938 | D | 0.563 | neutral | None | None | None | None | I |
N/C | 0.539 | ambiguous | 0.5874 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
N/D | 0.1903 | likely_benign | 0.2301 | benign | -0.308 | Destabilizing | 0.958 | D | 0.49 | neutral | N | 0.505102152 | None | None | I |
N/E | 0.8156 | likely_pathogenic | 0.8464 | pathogenic | -0.24 | Destabilizing | 0.968 | D | 0.569 | neutral | None | None | None | None | I |
N/F | 0.9098 | likely_pathogenic | 0.9168 | pathogenic | -0.701 | Destabilizing | 0.995 | D | 0.792 | deleterious | None | None | None | None | I |
N/G | 0.5016 | ambiguous | 0.5472 | ambiguous | -1.147 | Destabilizing | 0.968 | D | 0.447 | neutral | None | None | None | None | I |
N/H | 0.3136 | likely_benign | 0.3212 | benign | -0.989 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | N | 0.504699507 | None | None | I |
N/I | 0.8074 | likely_pathogenic | 0.819 | pathogenic | -0.036 | Destabilizing | 0.988 | D | 0.781 | deleterious | N | 0.486479705 | None | None | I |
N/K | 0.8042 | likely_pathogenic | 0.834 | pathogenic | -0.287 | Destabilizing | 0.958 | D | 0.589 | neutral | N | 0.485937601 | None | None | I |
N/L | 0.6501 | likely_pathogenic | 0.6615 | pathogenic | -0.036 | Destabilizing | 0.982 | D | 0.693 | prob.neutral | None | None | None | None | I |
N/M | 0.7403 | likely_pathogenic | 0.7517 | pathogenic | 0.473 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
N/P | 0.9666 | likely_pathogenic | 0.9739 | pathogenic | -0.271 | Destabilizing | 0.995 | D | 0.741 | deleterious | None | None | None | None | I |
N/Q | 0.7562 | likely_pathogenic | 0.7742 | pathogenic | -0.78 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/R | 0.8248 | likely_pathogenic | 0.8433 | pathogenic | -0.333 | Destabilizing | 0.991 | D | 0.682 | prob.neutral | None | None | None | None | I |
N/S | 0.134 | likely_benign | 0.1395 | benign | -0.781 | Destabilizing | 0.919 | D | 0.432 | neutral | N | 0.457521636 | None | None | I |
N/T | 0.1871 | likely_benign | 0.206 | benign | -0.526 | Destabilizing | 0.067 | N | 0.345 | neutral | N | 0.475934038 | None | None | I |
N/V | 0.7443 | likely_pathogenic | 0.7643 | pathogenic | -0.271 | Destabilizing | 0.982 | D | 0.706 | prob.neutral | None | None | None | None | I |
N/W | 0.9675 | likely_pathogenic | 0.9704 | pathogenic | -0.514 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
N/Y | 0.5942 | likely_pathogenic | 0.628 | pathogenic | -0.323 | Destabilizing | 0.998 | D | 0.762 | deleterious | N | 0.498000595 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.