Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22336 | 67231;67232;67233 | chr2:178580373;178580372;178580371 | chr2:179445100;179445099;179445098 |
N2AB | 20695 | 62308;62309;62310 | chr2:178580373;178580372;178580371 | chr2:179445100;179445099;179445098 |
N2A | 19768 | 59527;59528;59529 | chr2:178580373;178580372;178580371 | chr2:179445100;179445099;179445098 |
N2B | 13271 | 40036;40037;40038 | chr2:178580373;178580372;178580371 | chr2:179445100;179445099;179445098 |
Novex-1 | 13396 | 40411;40412;40413 | chr2:178580373;178580372;178580371 | chr2:179445100;179445099;179445098 |
Novex-2 | 13463 | 40612;40613;40614 | chr2:178580373;178580372;178580371 | chr2:179445100;179445099;179445098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.743 | 0.787 | 0.889071410426 | gnomAD-4.0.0 | 3.4222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6278 | likely_pathogenic | 0.6327 | pathogenic | -2.698 | Highly Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
L/C | 0.8312 | likely_pathogenic | 0.8191 | pathogenic | -2.003 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -3.142 | Highly Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/E | 0.9911 | likely_pathogenic | 0.9918 | pathogenic | -2.934 | Highly Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
L/F | 0.8106 | likely_pathogenic | 0.7939 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/G | 0.9694 | likely_pathogenic | 0.9725 | pathogenic | -3.23 | Highly Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/H | 0.9919 | likely_pathogenic | 0.992 | pathogenic | -2.679 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
L/I | 0.1666 | likely_benign | 0.1467 | benign | -1.163 | Destabilizing | 0.999 | D | 0.503 | neutral | None | None | None | None | N |
L/K | 0.9918 | likely_pathogenic | 0.993 | pathogenic | -2.246 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/M | 0.2377 | likely_benign | 0.2126 | benign | -1.078 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.495758869 | None | None | N |
L/N | 0.993 | likely_pathogenic | 0.9939 | pathogenic | -2.545 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/P | 0.9968 | likely_pathogenic | 0.9975 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.514116613 | None | None | N |
L/Q | 0.9642 | likely_pathogenic | 0.9667 | pathogenic | -2.442 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.514116613 | None | None | N |
L/R | 0.983 | likely_pathogenic | 0.985 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.514116613 | None | None | N |
L/S | 0.9547 | likely_pathogenic | 0.9563 | pathogenic | -3.207 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
L/T | 0.8362 | likely_pathogenic | 0.8356 | pathogenic | -2.86 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/V | 0.1663 | likely_benign | 0.1451 | benign | -1.656 | Destabilizing | 0.999 | D | 0.491 | neutral | N | 0.490049768 | None | None | N |
L/W | 0.9824 | likely_pathogenic | 0.9823 | pathogenic | -2.072 | Highly Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/Y | 0.9824 | likely_pathogenic | 0.982 | pathogenic | -1.804 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.