Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22337 | 67234;67235;67236 | chr2:178580370;178580369;178580368 | chr2:179445097;179445096;179445095 |
N2AB | 20696 | 62311;62312;62313 | chr2:178580370;178580369;178580368 | chr2:179445097;179445096;179445095 |
N2A | 19769 | 59530;59531;59532 | chr2:178580370;178580369;178580368 | chr2:179445097;179445096;179445095 |
N2B | 13272 | 40039;40040;40041 | chr2:178580370;178580369;178580368 | chr2:179445097;179445096;179445095 |
Novex-1 | 13397 | 40414;40415;40416 | chr2:178580370;178580369;178580368 | chr2:179445097;179445096;179445095 |
Novex-2 | 13464 | 40615;40616;40617 | chr2:178580370;178580369;178580368 | chr2:179445097;179445096;179445095 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs764858373 | 0.093 | 0.944 | D | 0.612 | 0.387 | 0.420939154896 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3824 | ambiguous | 0.3941 | ambiguous | -0.68 | Destabilizing | 0.805 | D | 0.579 | neutral | N | 0.488530393 | None | None | I |
E/C | 0.9194 | likely_pathogenic | 0.9199 | pathogenic | -0.108 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
E/D | 0.4246 | ambiguous | 0.4416 | ambiguous | -0.78 | Destabilizing | 0.981 | D | 0.494 | neutral | N | 0.485429748 | None | None | I |
E/F | 0.9343 | likely_pathogenic | 0.9372 | pathogenic | -0.654 | Destabilizing | 0.975 | D | 0.751 | deleterious | None | None | None | None | I |
E/G | 0.5573 | ambiguous | 0.5553 | ambiguous | -0.935 | Destabilizing | 0.983 | D | 0.67 | neutral | N | 0.495571512 | None | None | I |
E/H | 0.7335 | likely_pathogenic | 0.7307 | pathogenic | -0.845 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
E/I | 0.5961 | likely_pathogenic | 0.6237 | pathogenic | -0.019 | Destabilizing | 0.95 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/K | 0.4259 | ambiguous | 0.4351 | ambiguous | -0.054 | Destabilizing | 0.944 | D | 0.612 | neutral | D | 0.528189655 | None | None | I |
E/L | 0.7593 | likely_pathogenic | 0.7695 | pathogenic | -0.019 | Destabilizing | 0.845 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/M | 0.7103 | likely_pathogenic | 0.7153 | pathogenic | 0.372 | Stabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/N | 0.6216 | likely_pathogenic | 0.6355 | pathogenic | -0.34 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/P | 0.996 | likely_pathogenic | 0.9961 | pathogenic | -0.219 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/Q | 0.203 | likely_benign | 0.2048 | benign | -0.314 | Destabilizing | 0.994 | D | 0.637 | neutral | N | 0.511702837 | None | None | I |
E/R | 0.5806 | likely_pathogenic | 0.5853 | pathogenic | 0.022 | Stabilizing | 0.987 | D | 0.688 | prob.neutral | None | None | None | None | I |
E/S | 0.4138 | ambiguous | 0.4237 | ambiguous | -0.557 | Destabilizing | 0.957 | D | 0.649 | neutral | None | None | None | None | I |
E/T | 0.3876 | ambiguous | 0.4072 | ambiguous | -0.352 | Destabilizing | 0.975 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/V | 0.3912 | ambiguous | 0.4103 | ambiguous | -0.219 | Destabilizing | 0.056 | N | 0.465 | neutral | N | 0.490936703 | None | None | I |
E/W | 0.9706 | likely_pathogenic | 0.9714 | pathogenic | -0.513 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/Y | 0.8829 | likely_pathogenic | 0.8882 | pathogenic | -0.411 | Destabilizing | 0.987 | D | 0.724 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.