Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22340 | 67243;67244;67245 | chr2:178580361;178580360;178580359 | chr2:179445088;179445087;179445086 |
N2AB | 20699 | 62320;62321;62322 | chr2:178580361;178580360;178580359 | chr2:179445088;179445087;179445086 |
N2A | 19772 | 59539;59540;59541 | chr2:178580361;178580360;178580359 | chr2:179445088;179445087;179445086 |
N2B | 13275 | 40048;40049;40050 | chr2:178580361;178580360;178580359 | chr2:179445088;179445087;179445086 |
Novex-1 | 13400 | 40423;40424;40425 | chr2:178580361;178580360;178580359 | chr2:179445088;179445087;179445086 |
Novex-2 | 13467 | 40624;40625;40626 | chr2:178580361;178580360;178580359 | chr2:179445088;179445087;179445086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.055 | N | 0.537 | 0.3 | 0.514755673002 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | I | None | 6.33553E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2887 | likely_benign | 0.2719 | benign | -0.412 | Destabilizing | 0.003 | N | 0.27 | neutral | None | None | None | None | I |
C/D | 0.8519 | likely_pathogenic | 0.8297 | pathogenic | 0.22 | Stabilizing | 0.031 | N | 0.517 | neutral | None | None | None | None | I |
C/E | 0.8822 | likely_pathogenic | 0.8618 | pathogenic | 0.159 | Stabilizing | 0.031 | N | 0.513 | neutral | None | None | None | None | I |
C/F | 0.2968 | likely_benign | 0.2764 | benign | -0.668 | Destabilizing | 0.055 | N | 0.567 | neutral | N | 0.400204128 | None | None | I |
C/G | 0.2447 | likely_benign | 0.2327 | benign | -0.455 | Destabilizing | 0.012 | N | 0.585 | neutral | N | 0.429102883 | None | None | I |
C/H | 0.5722 | likely_pathogenic | 0.5431 | ambiguous | -0.375 | Destabilizing | 0.628 | D | 0.555 | neutral | None | None | None | None | I |
C/I | 0.5582 | ambiguous | 0.5265 | ambiguous | -0.387 | Destabilizing | 0.006 | N | 0.497 | neutral | None | None | None | None | I |
C/K | 0.8973 | likely_pathogenic | 0.8917 | pathogenic | 0.092 | Stabilizing | 0.031 | N | 0.522 | neutral | None | None | None | None | I |
C/L | 0.5148 | ambiguous | 0.4884 | ambiguous | -0.387 | Destabilizing | 0.007 | N | 0.503 | neutral | None | None | None | None | I |
C/M | 0.6378 | likely_pathogenic | 0.6159 | pathogenic | -0.164 | Destabilizing | 0.214 | N | 0.506 | neutral | None | None | None | None | I |
C/N | 0.5657 | likely_pathogenic | 0.5141 | ambiguous | 0.39 | Stabilizing | 0.072 | N | 0.525 | neutral | None | None | None | None | I |
C/P | 0.9748 | likely_pathogenic | 0.9707 | pathogenic | -0.378 | Destabilizing | 0.136 | N | 0.537 | neutral | None | None | None | None | I |
C/Q | 0.7229 | likely_pathogenic | 0.7117 | pathogenic | 0.216 | Stabilizing | 0.136 | N | 0.54 | neutral | None | None | None | None | I |
C/R | 0.6716 | likely_pathogenic | 0.661 | pathogenic | 0.379 | Stabilizing | 0.055 | N | 0.537 | neutral | N | 0.426910727 | None | None | I |
C/S | 0.1889 | likely_benign | 0.1684 | benign | 0.022 | Stabilizing | None | N | 0.336 | neutral | N | 0.344446846 | None | None | I |
C/T | 0.4121 | ambiguous | 0.3869 | ambiguous | 0.045 | Stabilizing | 0.007 | N | 0.499 | neutral | None | None | None | None | I |
C/V | 0.4067 | ambiguous | 0.3838 | ambiguous | -0.378 | Destabilizing | None | N | 0.338 | neutral | None | None | None | None | I |
C/W | 0.6528 | likely_pathogenic | 0.6568 | pathogenic | -0.67 | Destabilizing | 0.828 | D | 0.569 | neutral | N | 0.486516391 | None | None | I |
C/Y | 0.4112 | ambiguous | 0.3805 | ambiguous | -0.476 | Destabilizing | 0.295 | N | 0.579 | neutral | N | 0.442282824 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.