Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22344 | 67255;67256;67257 | chr2:178580349;178580348;178580347 | chr2:179445076;179445075;179445074 |
N2AB | 20703 | 62332;62333;62334 | chr2:178580349;178580348;178580347 | chr2:179445076;179445075;179445074 |
N2A | 19776 | 59551;59552;59553 | chr2:178580349;178580348;178580347 | chr2:179445076;179445075;179445074 |
N2B | 13279 | 40060;40061;40062 | chr2:178580349;178580348;178580347 | chr2:179445076;179445075;179445074 |
Novex-1 | 13404 | 40435;40436;40437 | chr2:178580349;178580348;178580347 | chr2:179445076;179445075;179445074 |
Novex-2 | 13471 | 40636;40637;40638 | chr2:178580349;178580348;178580347 | chr2:179445076;179445075;179445074 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1022112057 | None | 0.425 | N | 0.25 | 0.086 | 0.33340067248 | gnomAD-4.0.0 | 1.59273E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1613 | likely_benign | 0.1531 | benign | -0.714 | Destabilizing | 0.002 | N | 0.131 | neutral | N | 0.490079558 | None | None | I |
E/C | 0.8199 | likely_pathogenic | 0.8178 | pathogenic | -0.451 | Destabilizing | 0.981 | D | 0.321 | neutral | None | None | None | None | I |
E/D | 0.2079 | likely_benign | 0.1881 | benign | -0.797 | Destabilizing | 0.425 | N | 0.25 | neutral | N | 0.499584476 | None | None | I |
E/F | 0.8797 | likely_pathogenic | 0.8654 | pathogenic | 0.032 | Stabilizing | 0.944 | D | 0.389 | neutral | None | None | None | None | I |
E/G | 0.2962 | likely_benign | 0.2793 | benign | -1.062 | Destabilizing | 0.27 | N | 0.325 | neutral | N | 0.501322412 | None | None | I |
E/H | 0.6438 | likely_pathogenic | 0.6158 | pathogenic | 0.003 | Stabilizing | 0.981 | D | 0.293 | neutral | None | None | None | None | I |
E/I | 0.4016 | ambiguous | 0.3791 | ambiguous | 0.233 | Stabilizing | 0.704 | D | 0.443 | neutral | None | None | None | None | I |
E/K | 0.3914 | ambiguous | 0.3721 | ambiguous | -0.29 | Destabilizing | 0.425 | N | 0.251 | neutral | N | 0.504123504 | None | None | I |
E/L | 0.5951 | likely_pathogenic | 0.5732 | pathogenic | 0.233 | Stabilizing | 0.329 | N | 0.37 | neutral | None | None | None | None | I |
E/M | 0.487 | ambiguous | 0.4622 | ambiguous | 0.46 | Stabilizing | 0.981 | D | 0.324 | neutral | None | None | None | None | I |
E/N | 0.3011 | likely_benign | 0.2744 | benign | -0.927 | Destabilizing | 0.495 | N | 0.188 | neutral | None | None | None | None | I |
E/P | 0.8959 | likely_pathogenic | 0.8988 | pathogenic | -0.061 | Destabilizing | 0.828 | D | 0.329 | neutral | None | None | None | None | I |
E/Q | 0.1605 | likely_benign | 0.1604 | benign | -0.775 | Destabilizing | 0.784 | D | 0.228 | neutral | N | 0.491887712 | None | None | I |
E/R | 0.5555 | ambiguous | 0.5447 | ambiguous | 0.088 | Stabilizing | 0.704 | D | 0.185 | neutral | None | None | None | None | I |
E/S | 0.1492 | likely_benign | 0.136 | benign | -1.174 | Destabilizing | 0.004 | N | 0.122 | neutral | None | None | None | None | I |
E/T | 0.1425 | likely_benign | 0.1359 | benign | -0.873 | Destabilizing | 0.004 | N | 0.124 | neutral | None | None | None | None | I |
E/V | 0.2552 | likely_benign | 0.2446 | benign | -0.061 | Destabilizing | 0.27 | N | 0.334 | neutral | N | 0.503067498 | None | None | I |
E/W | 0.9653 | likely_pathogenic | 0.9608 | pathogenic | 0.36 | Stabilizing | 0.995 | D | 0.339 | neutral | None | None | None | None | I |
E/Y | 0.783 | likely_pathogenic | 0.7607 | pathogenic | 0.309 | Stabilizing | 0.981 | D | 0.349 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.