Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22346 | 67261;67262;67263 | chr2:178580343;178580342;178580341 | chr2:179445070;179445069;179445068 |
N2AB | 20705 | 62338;62339;62340 | chr2:178580343;178580342;178580341 | chr2:179445070;179445069;179445068 |
N2A | 19778 | 59557;59558;59559 | chr2:178580343;178580342;178580341 | chr2:179445070;179445069;179445068 |
N2B | 13281 | 40066;40067;40068 | chr2:178580343;178580342;178580341 | chr2:179445070;179445069;179445068 |
Novex-1 | 13406 | 40441;40442;40443 | chr2:178580343;178580342;178580341 | chr2:179445070;179445069;179445068 |
Novex-2 | 13473 | 40642;40643;40644 | chr2:178580343;178580342;178580341 | chr2:179445070;179445069;179445068 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.946 | N | 0.785 | 0.506 | 0.477219869099 | gnomAD-4.0.0 | 6.84524E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99764E-07 | 0 | 0 |
T/N | rs1283475494 | -0.08 | 0.973 | N | 0.753 | 0.435 | 0.432936702747 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 1.29249E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/N | rs1283475494 | -0.08 | 0.973 | N | 0.753 | 0.435 | 0.432936702747 | gnomAD-4.0.0 | 2.05357E-06 | None | None | None | None | I | None | 8.97344E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.142 | likely_benign | 0.1502 | benign | -0.396 | Destabilizing | 0.016 | N | 0.351 | neutral | N | 0.490087329 | None | None | I |
T/C | 0.606 | likely_pathogenic | 0.5763 | pathogenic | -0.372 | Destabilizing | 0.994 | D | 0.757 | deleterious | None | None | None | None | I |
T/D | 0.7697 | likely_pathogenic | 0.8046 | pathogenic | 0.345 | Stabilizing | 0.959 | D | 0.778 | deleterious | None | None | None | None | I |
T/E | 0.668 | likely_pathogenic | 0.7041 | pathogenic | 0.321 | Stabilizing | 0.959 | D | 0.747 | deleterious | None | None | None | None | I |
T/F | 0.4443 | ambiguous | 0.443 | ambiguous | -0.631 | Destabilizing | 0.979 | D | 0.837 | deleterious | None | None | None | None | I |
T/G | 0.4434 | ambiguous | 0.4729 | ambiguous | -0.6 | Destabilizing | 0.769 | D | 0.725 | prob.delet. | None | None | None | None | I |
T/H | 0.4744 | ambiguous | 0.4695 | ambiguous | -0.8 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | I |
T/I | 0.3511 | ambiguous | 0.3361 | benign | 0.037 | Stabilizing | 0.946 | D | 0.785 | deleterious | N | 0.499343721 | None | None | I |
T/K | 0.6043 | likely_pathogenic | 0.658 | pathogenic | -0.415 | Destabilizing | 0.959 | D | 0.742 | deleterious | None | None | None | None | I |
T/L | 0.2255 | likely_benign | 0.2299 | benign | 0.037 | Stabilizing | 0.769 | D | 0.645 | neutral | None | None | None | None | I |
T/M | 0.1694 | likely_benign | 0.1539 | benign | -0.017 | Destabilizing | 0.994 | D | 0.766 | deleterious | None | None | None | None | I |
T/N | 0.2071 | likely_benign | 0.2294 | benign | -0.311 | Destabilizing | 0.973 | D | 0.753 | deleterious | N | 0.518879526 | None | None | I |
T/P | 0.279 | likely_benign | 0.3458 | ambiguous | -0.075 | Destabilizing | 0.946 | D | 0.791 | deleterious | N | 0.4998507 | None | None | I |
T/Q | 0.4728 | ambiguous | 0.4962 | ambiguous | -0.424 | Destabilizing | 0.979 | D | 0.787 | deleterious | None | None | None | None | I |
T/R | 0.53 | ambiguous | 0.5824 | pathogenic | -0.213 | Destabilizing | 0.959 | D | 0.784 | deleterious | None | None | None | None | I |
T/S | 0.1664 | likely_benign | 0.1751 | benign | -0.57 | Destabilizing | 0.716 | D | 0.501 | neutral | N | 0.516164507 | None | None | I |
T/V | 0.2276 | likely_benign | 0.2209 | benign | -0.075 | Destabilizing | 0.769 | D | 0.558 | neutral | None | None | None | None | I |
T/W | 0.8319 | likely_pathogenic | 0.8147 | pathogenic | -0.646 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | I |
T/Y | 0.48 | ambiguous | 0.4677 | ambiguous | -0.363 | Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.