Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22347 | 67264;67265;67266 | chr2:178580340;178580339;178580338 | chr2:179445067;179445066;179445065 |
N2AB | 20706 | 62341;62342;62343 | chr2:178580340;178580339;178580338 | chr2:179445067;179445066;179445065 |
N2A | 19779 | 59560;59561;59562 | chr2:178580340;178580339;178580338 | chr2:179445067;179445066;179445065 |
N2B | 13282 | 40069;40070;40071 | chr2:178580340;178580339;178580338 | chr2:179445067;179445066;179445065 |
Novex-1 | 13407 | 40444;40445;40446 | chr2:178580340;178580339;178580338 | chr2:179445067;179445066;179445065 |
Novex-2 | 13474 | 40645;40646;40647 | chr2:178580340;178580339;178580338 | chr2:179445067;179445066;179445065 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.008 | N | 0.501 | 0.307 | 0.712308658724 | gnomAD-4.0.0 | 9.60368E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.05012E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7698 | likely_pathogenic | 0.7537 | pathogenic | -2.568 | Highly Destabilizing | 0.415 | N | 0.675 | prob.neutral | None | None | None | None | N |
I/C | 0.922 | likely_pathogenic | 0.9014 | pathogenic | -2.092 | Highly Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/D | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.234 | Highly Destabilizing | 0.923 | D | 0.827 | deleterious | None | None | None | None | N |
I/E | 0.9961 | likely_pathogenic | 0.9953 | pathogenic | -1.982 | Destabilizing | 0.923 | D | 0.822 | deleterious | None | None | None | None | N |
I/F | 0.5827 | likely_pathogenic | 0.4775 | ambiguous | -1.426 | Destabilizing | 0.901 | D | 0.693 | prob.neutral | D | 0.526517574 | None | None | N |
I/G | 0.9871 | likely_pathogenic | 0.9841 | pathogenic | -3.157 | Highly Destabilizing | 0.923 | D | 0.816 | deleterious | None | None | None | None | N |
I/H | 0.9948 | likely_pathogenic | 0.9926 | pathogenic | -2.461 | Highly Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
I/K | 0.9926 | likely_pathogenic | 0.991 | pathogenic | -1.995 | Destabilizing | 0.923 | D | 0.819 | deleterious | None | None | None | None | N |
I/L | 0.297 | likely_benign | 0.2522 | benign | -0.864 | Destabilizing | 0.19 | N | 0.5 | neutral | N | 0.473643094 | None | None | N |
I/M | 0.2916 | likely_benign | 0.217 | benign | -0.963 | Destabilizing | 0.949 | D | 0.679 | prob.neutral | N | 0.52041049 | None | None | N |
I/N | 0.9811 | likely_pathogenic | 0.9776 | pathogenic | -2.329 | Highly Destabilizing | 0.901 | D | 0.828 | deleterious | N | 0.520917469 | None | None | N |
I/P | 0.9941 | likely_pathogenic | 0.9939 | pathogenic | -1.412 | Destabilizing | 0.961 | D | 0.827 | deleterious | None | None | None | None | N |
I/Q | 0.9919 | likely_pathogenic | 0.9894 | pathogenic | -2.117 | Highly Destabilizing | 0.961 | D | 0.834 | deleterious | None | None | None | None | N |
I/R | 0.9868 | likely_pathogenic | 0.9851 | pathogenic | -1.814 | Destabilizing | 0.923 | D | 0.829 | deleterious | None | None | None | None | N |
I/S | 0.9465 | likely_pathogenic | 0.9403 | pathogenic | -3.179 | Highly Destabilizing | 0.565 | D | 0.77 | deleterious | N | 0.490442951 | None | None | N |
I/T | 0.8117 | likely_pathogenic | 0.7986 | pathogenic | -2.754 | Highly Destabilizing | 0.008 | N | 0.501 | neutral | N | 0.501292277 | None | None | N |
I/V | 0.0863 | likely_benign | 0.082 | benign | -1.412 | Destabilizing | 0.003 | N | 0.212 | neutral | N | 0.456577486 | None | None | N |
I/W | 0.9933 | likely_pathogenic | 0.9903 | pathogenic | -1.671 | Destabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | N |
I/Y | 0.963 | likely_pathogenic | 0.9502 | pathogenic | -1.432 | Destabilizing | 0.961 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.