Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22349 | 67270;67271;67272 | chr2:178580334;178580333;178580332 | chr2:179445061;179445060;179445059 |
N2AB | 20708 | 62347;62348;62349 | chr2:178580334;178580333;178580332 | chr2:179445061;179445060;179445059 |
N2A | 19781 | 59566;59567;59568 | chr2:178580334;178580333;178580332 | chr2:179445061;179445060;179445059 |
N2B | 13284 | 40075;40076;40077 | chr2:178580334;178580333;178580332 | chr2:179445061;179445060;179445059 |
Novex-1 | 13409 | 40450;40451;40452 | chr2:178580334;178580333;178580332 | chr2:179445061;179445060;179445059 |
Novex-2 | 13476 | 40651;40652;40653 | chr2:178580334;178580333;178580332 | chr2:179445061;179445060;179445059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.628 | 0.448 | 0.657750020267 | gnomAD-4.0.0 | 1.59393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86139E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9377 | likely_pathogenic | 0.9321 | pathogenic | -2.209 | Highly Destabilizing | 0.999 | D | 0.628 | neutral | N | 0.516039402 | None | None | N |
V/C | 0.9663 | likely_pathogenic | 0.9579 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/D | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -2.959 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/E | 0.9969 | likely_pathogenic | 0.9969 | pathogenic | -2.71 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | N | 0.516546381 | None | None | N |
V/F | 0.9233 | likely_pathogenic | 0.9327 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/G | 0.9625 | likely_pathogenic | 0.9627 | pathogenic | -2.781 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.516546381 | None | None | N |
V/H | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -2.59 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/I | 0.1465 | likely_benign | 0.1356 | benign | -0.594 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9973 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/L | 0.7484 | likely_pathogenic | 0.7421 | pathogenic | -0.594 | Destabilizing | 0.997 | D | 0.647 | neutral | N | 0.439349745 | None | None | N |
V/M | 0.8635 | likely_pathogenic | 0.8554 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.515532423 | None | None | N |
V/N | 0.9956 | likely_pathogenic | 0.9953 | pathogenic | -2.421 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/P | 0.9955 | likely_pathogenic | 0.9959 | pathogenic | -1.107 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9961 | likely_pathogenic | 0.9964 | pathogenic | -2.208 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/R | 0.9941 | likely_pathogenic | 0.9954 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/S | 0.9849 | likely_pathogenic | 0.9842 | pathogenic | -3.025 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/T | 0.9366 | likely_pathogenic | 0.9264 | pathogenic | -2.626 | Highly Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
V/W | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9956 | likely_pathogenic | 0.9964 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.