Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22350 | 67273;67274;67275 | chr2:178580331;178580330;178580329 | chr2:179445058;179445057;179445056 |
N2AB | 20709 | 62350;62351;62352 | chr2:178580331;178580330;178580329 | chr2:179445058;179445057;179445056 |
N2A | 19782 | 59569;59570;59571 | chr2:178580331;178580330;178580329 | chr2:179445058;179445057;179445056 |
N2B | 13285 | 40078;40079;40080 | chr2:178580331;178580330;178580329 | chr2:179445058;179445057;179445056 |
Novex-1 | 13410 | 40453;40454;40455 | chr2:178580331;178580330;178580329 | chr2:179445058;179445057;179445056 |
Novex-2 | 13477 | 40654;40655;40656 | chr2:178580331;178580330;178580329 | chr2:179445058;179445057;179445056 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1370592733 | 0.005 | 0.957 | N | 0.643 | 0.354 | 0.33340067248 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
K/Q | rs1370592733 | 0.005 | 0.957 | N | 0.643 | 0.354 | 0.33340067248 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/Q | rs1370592733 | 0.005 | 0.957 | N | 0.643 | 0.354 | 0.33340067248 | gnomAD-4.0.0 | 3.72098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08772E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9459 | likely_pathogenic | 0.9627 | pathogenic | -0.339 | Destabilizing | 0.895 | D | 0.608 | neutral | None | None | None | None | N |
K/C | 0.9652 | likely_pathogenic | 0.9716 | pathogenic | -0.576 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
K/D | 0.9689 | likely_pathogenic | 0.9789 | pathogenic | 0.052 | Stabilizing | 0.895 | D | 0.653 | neutral | None | None | None | None | N |
K/E | 0.8382 | likely_pathogenic | 0.9033 | pathogenic | 0.165 | Stabilizing | 0.039 | N | 0.385 | neutral | D | 0.529056447 | None | None | N |
K/F | 0.9928 | likely_pathogenic | 0.9952 | pathogenic | -0.025 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/G | 0.9746 | likely_pathogenic | 0.9829 | pathogenic | -0.685 | Destabilizing | 0.983 | D | 0.641 | neutral | None | None | None | None | N |
K/H | 0.7008 | likely_pathogenic | 0.7268 | pathogenic | -0.847 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | N |
K/I | 0.9272 | likely_pathogenic | 0.9503 | pathogenic | 0.545 | Stabilizing | 0.989 | D | 0.736 | prob.delet. | D | 0.530616672 | None | None | N |
K/L | 0.9062 | likely_pathogenic | 0.9329 | pathogenic | 0.545 | Stabilizing | 0.983 | D | 0.641 | neutral | None | None | None | None | N |
K/M | 0.8406 | likely_pathogenic | 0.8873 | pathogenic | 0.139 | Stabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
K/N | 0.9253 | likely_pathogenic | 0.9516 | pathogenic | -0.426 | Destabilizing | 0.978 | D | 0.649 | neutral | N | 0.501229825 | None | None | N |
K/P | 0.9977 | likely_pathogenic | 0.9979 | pathogenic | 0.281 | Stabilizing | 0.992 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/Q | 0.548 | ambiguous | 0.644 | pathogenic | -0.416 | Destabilizing | 0.957 | D | 0.643 | neutral | N | 0.483072664 | None | None | N |
K/R | 0.1258 | likely_benign | 0.1353 | benign | -0.452 | Destabilizing | 0.928 | D | 0.535 | neutral | N | 0.490751562 | None | None | N |
K/S | 0.9446 | likely_pathogenic | 0.9637 | pathogenic | -1.012 | Destabilizing | 0.895 | D | 0.589 | neutral | None | None | None | None | N |
K/T | 0.7818 | likely_pathogenic | 0.8277 | pathogenic | -0.697 | Destabilizing | 0.978 | D | 0.681 | prob.neutral | D | 0.523783913 | None | None | N |
K/V | 0.8985 | likely_pathogenic | 0.9209 | pathogenic | 0.281 | Stabilizing | 0.983 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/W | 0.9841 | likely_pathogenic | 0.9877 | pathogenic | 0.028 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
K/Y | 0.965 | likely_pathogenic | 0.9741 | pathogenic | 0.327 | Stabilizing | 0.997 | D | 0.706 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.