Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22354 | 67285;67286;67287 | chr2:178580227;178580226;178580225 | chr2:179444954;179444953;179444952 |
N2AB | 20713 | 62362;62363;62364 | chr2:178580227;178580226;178580225 | chr2:179444954;179444953;179444952 |
N2A | 19786 | 59581;59582;59583 | chr2:178580227;178580226;178580225 | chr2:179444954;179444953;179444952 |
N2B | 13289 | 40090;40091;40092 | chr2:178580227;178580226;178580225 | chr2:179444954;179444953;179444952 |
Novex-1 | 13414 | 40465;40466;40467 | chr2:178580227;178580226;178580225 | chr2:179444954;179444953;179444952 |
Novex-2 | 13481 | 40666;40667;40668 | chr2:178580227;178580226;178580225 | chr2:179444954;179444953;179444952 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1159944072 | -0.992 | 0.894 | N | 0.354 | 0.119 | 0.187945064343 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1159944072 | -0.992 | 0.894 | N | 0.354 | 0.119 | 0.187945064343 | gnomAD-4.0.0 | 3.42532E-06 | None | None | None | None | I | None | 0 | 2.2484E-05 | None | 0 | 0 | None | 0 | 0 | 3.5996E-06 | 0 | 0 |
T/I | None | None | 0.997 | N | 0.579 | 0.307 | 0.276482976112 | gnomAD-4.0.0 | 1.20043E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31262E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1523 | likely_benign | 0.1719 | benign | -0.792 | Destabilizing | 0.894 | D | 0.354 | neutral | N | 0.503594202 | None | None | I |
T/C | 0.5726 | likely_pathogenic | 0.5731 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | I |
T/D | 0.8598 | likely_pathogenic | 0.8956 | pathogenic | -0.2 | Destabilizing | 0.995 | D | 0.572 | neutral | None | None | None | None | I |
T/E | 0.6876 | likely_pathogenic | 0.7505 | pathogenic | -0.262 | Destabilizing | 0.995 | D | 0.565 | neutral | None | None | None | None | I |
T/F | 0.6165 | likely_pathogenic | 0.6957 | pathogenic | -1.227 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | I |
T/G | 0.5444 | ambiguous | 0.5683 | pathogenic | -0.942 | Destabilizing | 0.982 | D | 0.541 | neutral | None | None | None | None | I |
T/H | 0.5729 | likely_pathogenic | 0.6392 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.705 | prob.delet. | None | None | None | None | I |
T/I | 0.3583 | ambiguous | 0.4316 | ambiguous | -0.499 | Destabilizing | 0.997 | D | 0.579 | neutral | N | 0.451448925 | None | None | I |
T/K | 0.3791 | ambiguous | 0.5104 | ambiguous | -0.555 | Destabilizing | 0.995 | D | 0.564 | neutral | None | None | None | None | I |
T/L | 0.2319 | likely_benign | 0.2834 | benign | -0.499 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | I |
T/M | 0.1762 | likely_benign | 0.19 | benign | -0.009 | Destabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | I |
T/N | 0.3256 | likely_benign | 0.3747 | ambiguous | -0.362 | Destabilizing | 0.993 | D | 0.569 | neutral | N | 0.480442187 | None | None | I |
T/P | 0.3025 | likely_benign | 0.4285 | ambiguous | -0.569 | Destabilizing | 0.997 | D | 0.574 | neutral | N | 0.495684008 | None | None | I |
T/Q | 0.4489 | ambiguous | 0.5152 | ambiguous | -0.705 | Destabilizing | 0.997 | D | 0.531 | neutral | None | None | None | None | I |
T/R | 0.3866 | ambiguous | 0.51 | ambiguous | -0.221 | Destabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | I |
T/S | 0.1702 | likely_benign | 0.1706 | benign | -0.625 | Destabilizing | 0.615 | D | 0.135 | neutral | N | 0.466366752 | None | None | I |
T/V | 0.2311 | likely_benign | 0.2781 | benign | -0.569 | Destabilizing | 0.991 | D | 0.572 | neutral | None | None | None | None | I |
T/W | 0.9274 | likely_pathogenic | 0.9415 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.691 | prob.delet. | None | None | None | None | I |
T/Y | 0.6382 | likely_pathogenic | 0.7023 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.731 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.