Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22357 | 67294;67295;67296 | chr2:178580218;178580217;178580216 | chr2:179444945;179444944;179444943 |
N2AB | 20716 | 62371;62372;62373 | chr2:178580218;178580217;178580216 | chr2:179444945;179444944;179444943 |
N2A | 19789 | 59590;59591;59592 | chr2:178580218;178580217;178580216 | chr2:179444945;179444944;179444943 |
N2B | 13292 | 40099;40100;40101 | chr2:178580218;178580217;178580216 | chr2:179444945;179444944;179444943 |
Novex-1 | 13417 | 40474;40475;40476 | chr2:178580218;178580217;178580216 | chr2:179444945;179444944;179444943 |
Novex-2 | 13484 | 40675;40676;40677 | chr2:178580218;178580217;178580216 | chr2:179444945;179444944;179444943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1446351991 | -1.29 | 1.0 | N | 0.805 | 0.487 | 0.405560941015 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
P/S | rs1446351991 | -1.29 | 1.0 | N | 0.805 | 0.487 | 0.405560941015 | gnomAD-4.0.0 | 7.53261E-06 | None | None | None | None | I | None | 2.9967E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99798E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1101 | likely_benign | 0.116 | benign | -1.521 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.45615812 | None | None | I |
P/C | 0.6344 | likely_pathogenic | 0.653 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
P/D | 0.8781 | likely_pathogenic | 0.8992 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
P/E | 0.6148 | likely_pathogenic | 0.6361 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
P/F | 0.7434 | likely_pathogenic | 0.7743 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | I |
P/G | 0.6166 | likely_pathogenic | 0.6469 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
P/H | 0.4932 | ambiguous | 0.5415 | ambiguous | -1.348 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
P/I | 0.5028 | ambiguous | 0.5529 | ambiguous | -0.839 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
P/K | 0.5439 | ambiguous | 0.581 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
P/L | 0.2829 | likely_benign | 0.3228 | benign | -0.839 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.546195796 | None | None | I |
P/M | 0.4869 | ambiguous | 0.5055 | ambiguous | -0.568 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
P/N | 0.7101 | likely_pathogenic | 0.7295 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
P/Q | 0.329 | likely_benign | 0.361 | ambiguous | -1.221 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.517923323 | None | None | I |
P/R | 0.4235 | ambiguous | 0.4696 | ambiguous | -0.637 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.512834441 | None | None | I |
P/S | 0.2679 | likely_benign | 0.2938 | benign | -1.415 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.500717667 | None | None | I |
P/T | 0.2893 | likely_benign | 0.3359 | benign | -1.352 | Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.519190771 | None | None | I |
P/V | 0.3807 | ambiguous | 0.4143 | ambiguous | -1.033 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
P/W | 0.9158 | likely_pathogenic | 0.9377 | pathogenic | -1.453 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
P/Y | 0.7552 | likely_pathogenic | 0.7956 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.