Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22360 | 67303;67304;67305 | chr2:178580209;178580208;178580207 | chr2:179444936;179444935;179444934 |
N2AB | 20719 | 62380;62381;62382 | chr2:178580209;178580208;178580207 | chr2:179444936;179444935;179444934 |
N2A | 19792 | 59599;59600;59601 | chr2:178580209;178580208;178580207 | chr2:179444936;179444935;179444934 |
N2B | 13295 | 40108;40109;40110 | chr2:178580209;178580208;178580207 | chr2:179444936;179444935;179444934 |
Novex-1 | 13420 | 40483;40484;40485 | chr2:178580209;178580208;178580207 | chr2:179444936;179444935;179444934 |
Novex-2 | 13487 | 40684;40685;40686 | chr2:178580209;178580208;178580207 | chr2:179444936;179444935;179444934 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.999 | N | 0.655 | 0.501 | 0.322230723748 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2879 | likely_benign | 0.2382 | benign | -0.269 | Destabilizing | 0.992 | D | 0.567 | neutral | None | None | None | None | I |
N/C | 0.3671 | ambiguous | 0.3057 | benign | 0.25 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
N/D | 0.1745 | likely_benign | 0.1521 | benign | 0.134 | Stabilizing | 0.998 | D | 0.562 | neutral | N | 0.517849657 | None | None | I |
N/E | 0.492 | ambiguous | 0.4293 | ambiguous | 0.1 | Stabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | I |
N/F | 0.6263 | likely_pathogenic | 0.5646 | pathogenic | -0.637 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | I |
N/G | 0.2961 | likely_benign | 0.267 | benign | -0.439 | Destabilizing | 0.996 | D | 0.49 | neutral | None | None | None | None | I |
N/H | 0.1466 | likely_benign | 0.1347 | benign | -0.418 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.489684666 | None | None | I |
N/I | 0.4719 | ambiguous | 0.405 | ambiguous | 0.087 | Stabilizing | 0.994 | D | 0.731 | prob.delet. | N | 0.520284088 | None | None | I |
N/K | 0.3989 | ambiguous | 0.3413 | ambiguous | 0.062 | Stabilizing | 0.994 | D | 0.585 | neutral | N | 0.50388307 | None | None | I |
N/L | 0.361 | ambiguous | 0.3195 | benign | 0.087 | Stabilizing | 0.983 | D | 0.574 | neutral | None | None | None | None | I |
N/M | 0.4404 | ambiguous | 0.3964 | ambiguous | 0.288 | Stabilizing | 0.96 | D | 0.41 | neutral | None | None | None | None | I |
N/P | 0.8482 | likely_pathogenic | 0.7916 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/Q | 0.3984 | ambiguous | 0.351 | ambiguous | -0.401 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
N/R | 0.4301 | ambiguous | 0.3833 | ambiguous | 0.121 | Stabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | I |
N/S | 0.1126 | likely_benign | 0.1065 | benign | -0.183 | Destabilizing | 0.994 | D | 0.488 | neutral | N | 0.505403222 | None | None | I |
N/T | 0.2269 | likely_benign | 0.189 | benign | -0.077 | Destabilizing | 0.994 | D | 0.585 | neutral | N | 0.490000607 | None | None | I |
N/V | 0.45 | ambiguous | 0.3739 | ambiguous | -0.005 | Destabilizing | 0.995 | D | 0.633 | neutral | None | None | None | None | I |
N/W | 0.836 | likely_pathogenic | 0.8144 | pathogenic | -0.646 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
N/Y | 0.2512 | likely_benign | 0.2248 | benign | -0.372 | Destabilizing | 0.999 | D | 0.743 | deleterious | D | 0.539148812 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.