Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22361 | 67306;67307;67308 | chr2:178580206;178580205;178580204 | chr2:179444933;179444932;179444931 |
N2AB | 20720 | 62383;62384;62385 | chr2:178580206;178580205;178580204 | chr2:179444933;179444932;179444931 |
N2A | 19793 | 59602;59603;59604 | chr2:178580206;178580205;178580204 | chr2:179444933;179444932;179444931 |
N2B | 13296 | 40111;40112;40113 | chr2:178580206;178580205;178580204 | chr2:179444933;179444932;179444931 |
Novex-1 | 13421 | 40486;40487;40488 | chr2:178580206;178580205;178580204 | chr2:179444933;179444932;179444931 |
Novex-2 | 13488 | 40687;40688;40689 | chr2:178580206;178580205;178580204 | chr2:179444933;179444932;179444931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.884 | N | 0.651 | 0.18 | 0.352048277211 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8515 | likely_pathogenic | 0.8245 | pathogenic | -1.805 | Destabilizing | 0.472 | N | 0.553 | neutral | N | 0.484529651 | None | None | I |
V/C | 0.9146 | likely_pathogenic | 0.8988 | pathogenic | -1.58 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/D | 0.9895 | likely_pathogenic | 0.9879 | pathogenic | -2.296 | Highly Destabilizing | 0.984 | D | 0.809 | deleterious | None | None | None | None | I |
V/E | 0.9784 | likely_pathogenic | 0.9735 | pathogenic | -2.23 | Highly Destabilizing | 0.939 | D | 0.771 | deleterious | N | 0.516205484 | None | None | I |
V/F | 0.5767 | likely_pathogenic | 0.5409 | ambiguous | -1.403 | Destabilizing | 0.742 | D | 0.741 | deleterious | None | None | None | None | I |
V/G | 0.8886 | likely_pathogenic | 0.8822 | pathogenic | -2.19 | Highly Destabilizing | 0.939 | D | 0.763 | deleterious | N | 0.517472932 | None | None | I |
V/H | 0.9914 | likely_pathogenic | 0.9898 | pathogenic | -1.852 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | I |
V/I | 0.0825 | likely_benign | 0.077 | benign | -0.804 | Destabilizing | 0.206 | N | 0.508 | neutral | None | None | None | None | I |
V/K | 0.9813 | likely_pathogenic | 0.9779 | pathogenic | -1.455 | Destabilizing | 0.854 | D | 0.767 | deleterious | None | None | None | None | I |
V/L | 0.3198 | likely_benign | 0.2711 | benign | -0.804 | Destabilizing | 0.001 | N | 0.217 | neutral | N | 0.373808882 | None | None | I |
V/M | 0.4477 | ambiguous | 0.3793 | ambiguous | -0.79 | Destabilizing | 0.884 | D | 0.651 | neutral | N | 0.478604622 | None | None | I |
V/N | 0.9628 | likely_pathogenic | 0.9582 | pathogenic | -1.471 | Destabilizing | 0.984 | D | 0.811 | deleterious | None | None | None | None | I |
V/P | 0.9281 | likely_pathogenic | 0.8827 | pathogenic | -1.106 | Destabilizing | 0.984 | D | 0.789 | deleterious | None | None | None | None | I |
V/Q | 0.9765 | likely_pathogenic | 0.9729 | pathogenic | -1.582 | Destabilizing | 0.984 | D | 0.794 | deleterious | None | None | None | None | I |
V/R | 0.9714 | likely_pathogenic | 0.9698 | pathogenic | -1.065 | Destabilizing | 0.953 | D | 0.809 | deleterious | None | None | None | None | I |
V/S | 0.942 | likely_pathogenic | 0.932 | pathogenic | -2.005 | Highly Destabilizing | 0.854 | D | 0.747 | deleterious | None | None | None | None | I |
V/T | 0.8454 | likely_pathogenic | 0.8251 | pathogenic | -1.822 | Destabilizing | 0.742 | D | 0.622 | neutral | None | None | None | None | I |
V/W | 0.9879 | likely_pathogenic | 0.9841 | pathogenic | -1.715 | Destabilizing | 0.996 | D | 0.798 | deleterious | None | None | None | None | I |
V/Y | 0.9532 | likely_pathogenic | 0.9469 | pathogenic | -1.374 | Destabilizing | 0.953 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.