Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22363 | 67312;67313;67314 | chr2:178580200;178580199;178580198 | chr2:179444927;179444926;179444925 |
N2AB | 20722 | 62389;62390;62391 | chr2:178580200;178580199;178580198 | chr2:179444927;179444926;179444925 |
N2A | 19795 | 59608;59609;59610 | chr2:178580200;178580199;178580198 | chr2:179444927;179444926;179444925 |
N2B | 13298 | 40117;40118;40119 | chr2:178580200;178580199;178580198 | chr2:179444927;179444926;179444925 |
Novex-1 | 13423 | 40492;40493;40494 | chr2:178580200;178580199;178580198 | chr2:179444927;179444926;179444925 |
Novex-2 | 13490 | 40693;40694;40695 | chr2:178580200;178580199;178580198 | chr2:179444927;179444926;179444925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1484693236 | -0.289 | 0.63 | N | 0.58 | 0.131 | 0.483816155017 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs1484693236 | -0.289 | 0.63 | N | 0.58 | 0.131 | 0.483816155017 | gnomAD-4.0.0 | 1.59307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43435E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4249 | ambiguous | 0.4097 | ambiguous | -1.46 | Destabilizing | 0.892 | D | 0.512 | neutral | N | 0.515345283 | None | None | N |
V/C | 0.8475 | likely_pathogenic | 0.8101 | pathogenic | -1.121 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9716 | likely_pathogenic | 0.9708 | pathogenic | -1.124 | Destabilizing | 0.994 | D | 0.863 | deleterious | D | 0.537983496 | None | None | N |
V/E | 0.9376 | likely_pathogenic | 0.9383 | pathogenic | -1.054 | Destabilizing | 0.996 | D | 0.848 | deleterious | None | None | None | None | N |
V/F | 0.5919 | likely_pathogenic | 0.567 | pathogenic | -0.95 | Destabilizing | 0.056 | N | 0.361 | neutral | N | 0.476714837 | None | None | N |
V/G | 0.709 | likely_pathogenic | 0.6872 | pathogenic | -1.852 | Destabilizing | 0.983 | D | 0.829 | deleterious | N | 0.518865283 | None | None | N |
V/H | 0.9784 | likely_pathogenic | 0.9757 | pathogenic | -1.372 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/I | 0.0957 | likely_benign | 0.0968 | benign | -0.46 | Destabilizing | 0.63 | D | 0.58 | neutral | N | 0.475328244 | None | None | N |
V/K | 0.9586 | likely_pathogenic | 0.9524 | pathogenic | -1.245 | Destabilizing | 0.987 | D | 0.851 | deleterious | None | None | None | None | N |
V/L | 0.4956 | ambiguous | 0.4599 | ambiguous | -0.46 | Destabilizing | 0.63 | D | 0.511 | neutral | N | 0.47089194 | None | None | N |
V/M | 0.4264 | ambiguous | 0.4091 | ambiguous | -0.467 | Destabilizing | 0.987 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/N | 0.9219 | likely_pathogenic | 0.9186 | pathogenic | -1.18 | Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | N |
V/P | 0.8143 | likely_pathogenic | 0.7922 | pathogenic | -0.758 | Destabilizing | 0.996 | D | 0.858 | deleterious | None | None | None | None | N |
V/Q | 0.9309 | likely_pathogenic | 0.9265 | pathogenic | -1.205 | Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | N |
V/R | 0.9371 | likely_pathogenic | 0.9304 | pathogenic | -0.887 | Destabilizing | 0.996 | D | 0.863 | deleterious | None | None | None | None | N |
V/S | 0.7308 | likely_pathogenic | 0.7273 | pathogenic | -1.788 | Destabilizing | 0.987 | D | 0.824 | deleterious | None | None | None | None | N |
V/T | 0.5915 | likely_pathogenic | 0.5588 | ambiguous | -1.579 | Destabilizing | 0.957 | D | 0.629 | neutral | None | None | None | None | N |
V/W | 0.9818 | likely_pathogenic | 0.9779 | pathogenic | -1.2 | Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
V/Y | 0.9348 | likely_pathogenic | 0.9261 | pathogenic | -0.868 | Destabilizing | 0.95 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.