Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2237 | 6934;6935;6936 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
N2AB | 2237 | 6934;6935;6936 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
N2A | 2237 | 6934;6935;6936 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
N2B | 2191 | 6796;6797;6798 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
Novex-1 | 2191 | 6796;6797;6798 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
Novex-2 | 2191 | 6796;6797;6798 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
Novex-3 | 2237 | 6934;6935;6936 | chr2:178775002;178775001;178775000 | chr2:179639729;179639728;179639727 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.984 | N | 0.585 | 0.443 | 0.631027719221 | gnomAD-4.0.0 | 1.59083E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77531E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1498 | likely_benign | 0.153 | benign | -0.373 | Destabilizing | 0.896 | D | 0.492 | neutral | N | 0.491522583 | None | None | N |
D/C | 0.5468 | ambiguous | 0.5449 | ambiguous | 0.177 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/E | 0.1353 | likely_benign | 0.1384 | benign | -0.427 | Destabilizing | 0.011 | N | 0.108 | neutral | N | 0.437262509 | None | None | N |
D/F | 0.5154 | ambiguous | 0.5149 | ambiguous | -0.413 | Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
D/G | 0.1321 | likely_benign | 0.1361 | benign | -0.605 | Destabilizing | 0.896 | D | 0.421 | neutral | N | 0.494912087 | None | None | N |
D/H | 0.2072 | likely_benign | 0.2102 | benign | -0.562 | Destabilizing | 0.984 | D | 0.519 | neutral | N | 0.512649789 | None | None | N |
D/I | 0.3507 | ambiguous | 0.3512 | ambiguous | 0.202 | Stabilizing | 0.988 | D | 0.653 | neutral | None | None | None | None | N |
D/K | 0.2491 | likely_benign | 0.2615 | benign | 0.253 | Stabilizing | 0.851 | D | 0.421 | neutral | None | None | None | None | N |
D/L | 0.3181 | likely_benign | 0.3232 | benign | 0.202 | Stabilizing | 0.976 | D | 0.587 | neutral | None | None | None | None | N |
D/M | 0.515 | ambiguous | 0.5182 | ambiguous | 0.594 | Stabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
D/N | 0.0749 | likely_benign | 0.075 | benign | -0.08 | Destabilizing | 0.103 | N | 0.241 | neutral | N | 0.493720086 | None | None | N |
D/P | 0.8887 | likely_pathogenic | 0.8888 | pathogenic | 0.034 | Stabilizing | 0.988 | D | 0.501 | neutral | None | None | None | None | N |
D/Q | 0.237 | likely_benign | 0.2436 | benign | -0.027 | Destabilizing | 0.851 | D | 0.419 | neutral | None | None | None | None | N |
D/R | 0.2987 | likely_benign | 0.3083 | benign | 0.261 | Stabilizing | 0.976 | D | 0.545 | neutral | None | None | None | None | N |
D/S | 0.0965 | likely_benign | 0.0962 | benign | -0.195 | Destabilizing | 0.919 | D | 0.367 | neutral | None | None | None | None | N |
D/T | 0.1791 | likely_benign | 0.1775 | benign | -0.008 | Destabilizing | 0.919 | D | 0.461 | neutral | None | None | None | None | N |
D/V | 0.2288 | likely_benign | 0.2313 | benign | 0.034 | Stabilizing | 0.984 | D | 0.585 | neutral | N | 0.455821238 | None | None | N |
D/W | 0.8677 | likely_pathogenic | 0.8697 | pathogenic | -0.311 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/Y | 0.235 | likely_benign | 0.2423 | benign | -0.184 | Destabilizing | 0.995 | D | 0.657 | neutral | N | 0.511365707 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.