Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22371 | 67336;67337;67338 | chr2:178580176;178580175;178580174 | chr2:179444903;179444902;179444901 |
N2AB | 20730 | 62413;62414;62415 | chr2:178580176;178580175;178580174 | chr2:179444903;179444902;179444901 |
N2A | 19803 | 59632;59633;59634 | chr2:178580176;178580175;178580174 | chr2:179444903;179444902;179444901 |
N2B | 13306 | 40141;40142;40143 | chr2:178580176;178580175;178580174 | chr2:179444903;179444902;179444901 |
Novex-1 | 13431 | 40516;40517;40518 | chr2:178580176;178580175;178580174 | chr2:179444903;179444902;179444901 |
Novex-2 | 13498 | 40717;40718;40719 | chr2:178580176;178580175;178580174 | chr2:179444903;179444902;179444901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs2047373918 | None | 0.79 | N | 0.363 | 0.277 | 0.220303561663 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
A/V | rs2047373918 | None | 0.79 | N | 0.363 | 0.277 | 0.220303561663 | gnomAD-4.0.0 | 6.57497E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4282 | ambiguous | 0.4159 | ambiguous | -1.26 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/D | 0.9909 | likely_pathogenic | 0.9896 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.510082055 | None | None | N |
A/E | 0.9833 | likely_pathogenic | 0.98 | pathogenic | -1.678 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
A/F | 0.8896 | likely_pathogenic | 0.8689 | pathogenic | -0.656 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
A/G | 0.3459 | ambiguous | 0.314 | benign | -1.523 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.49872575 | None | None | N |
A/H | 0.989 | likely_pathogenic | 0.9865 | pathogenic | -1.929 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
A/I | 0.418 | ambiguous | 0.3469 | ambiguous | 0.338 | Stabilizing | 0.988 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/K | 0.9944 | likely_pathogenic | 0.9925 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
A/L | 0.4674 | ambiguous | 0.4082 | ambiguous | 0.338 | Stabilizing | 0.988 | D | 0.671 | neutral | None | None | None | None | N |
A/M | 0.6582 | likely_pathogenic | 0.593 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
A/N | 0.9682 | likely_pathogenic | 0.963 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
A/P | 0.9785 | likely_pathogenic | 0.9775 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.510082055 | None | None | N |
A/Q | 0.9726 | likely_pathogenic | 0.9656 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
A/R | 0.982 | likely_pathogenic | 0.9786 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/S | 0.318 | likely_benign | 0.308 | benign | -1.854 | Destabilizing | 0.996 | D | 0.639 | neutral | N | 0.480368006 | None | None | N |
A/T | 0.2888 | likely_benign | 0.2556 | benign | -1.482 | Destabilizing | 0.992 | D | 0.65 | neutral | N | 0.48307703 | None | None | N |
A/V | 0.1744 | likely_benign | 0.1479 | benign | -0.07 | Destabilizing | 0.79 | D | 0.363 | neutral | N | 0.360644797 | None | None | N |
A/W | 0.9943 | likely_pathogenic | 0.9927 | pathogenic | -1.362 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/Y | 0.9698 | likely_pathogenic | 0.9641 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.