Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22377 | 67354;67355;67356 | chr2:178580158;178580157;178580156 | chr2:179444885;179444884;179444883 |
N2AB | 20736 | 62431;62432;62433 | chr2:178580158;178580157;178580156 | chr2:179444885;179444884;179444883 |
N2A | 19809 | 59650;59651;59652 | chr2:178580158;178580157;178580156 | chr2:179444885;179444884;179444883 |
N2B | 13312 | 40159;40160;40161 | chr2:178580158;178580157;178580156 | chr2:179444885;179444884;179444883 |
Novex-1 | 13437 | 40534;40535;40536 | chr2:178580158;178580157;178580156 | chr2:179444885;179444884;179444883 |
Novex-2 | 13504 | 40735;40736;40737 | chr2:178580158;178580157;178580156 | chr2:179444885;179444884;179444883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs771093991 | -0.572 | 0.976 | N | 0.747 | 0.473 | 0.75672024113 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.96143E-04 | None | 0 | 0 | 0 |
P/L | rs771093991 | -0.572 | 0.976 | N | 0.747 | 0.473 | 0.75672024113 | gnomAD-4.0.0 | 8.89758E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.50756E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0897 | likely_benign | 0.088 | benign | -1.74 | Destabilizing | 0.067 | N | 0.295 | neutral | N | 0.488604186 | None | None | I |
P/C | 0.6865 | likely_pathogenic | 0.643 | pathogenic | -1.173 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
P/D | 0.7368 | likely_pathogenic | 0.7444 | pathogenic | -2.124 | Highly Destabilizing | 0.995 | D | 0.748 | deleterious | None | None | None | None | I |
P/E | 0.4698 | ambiguous | 0.4688 | ambiguous | -2.018 | Highly Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/F | 0.7037 | likely_pathogenic | 0.6807 | pathogenic | -1.19 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | I |
P/G | 0.5114 | ambiguous | 0.5083 | ambiguous | -2.126 | Highly Destabilizing | 0.938 | D | 0.639 | neutral | None | None | None | None | I |
P/H | 0.4231 | ambiguous | 0.4018 | ambiguous | -1.595 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.515688959 | None | None | I |
P/I | 0.3412 | ambiguous | 0.3073 | benign | -0.725 | Destabilizing | 0.991 | D | 0.819 | deleterious | None | None | None | None | I |
P/K | 0.4851 | ambiguous | 0.4902 | ambiguous | -1.622 | Destabilizing | 0.991 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/L | 0.1547 | likely_benign | 0.1449 | benign | -0.725 | Destabilizing | 0.976 | D | 0.747 | deleterious | N | 0.503661091 | None | None | I |
P/M | 0.2921 | likely_benign | 0.2602 | benign | -0.639 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
P/N | 0.4976 | ambiguous | 0.4906 | ambiguous | -1.655 | Destabilizing | 0.995 | D | 0.817 | deleterious | None | None | None | None | I |
P/Q | 0.2663 | likely_benign | 0.2533 | benign | -1.701 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | I |
P/R | 0.4328 | ambiguous | 0.4309 | ambiguous | -1.171 | Destabilizing | 0.994 | D | 0.805 | deleterious | N | 0.49419089 | None | None | I |
P/S | 0.2026 | likely_benign | 0.1965 | benign | -2.131 | Highly Destabilizing | 0.919 | D | 0.619 | neutral | N | 0.48718945 | None | None | I |
P/T | 0.163 | likely_benign | 0.1563 | benign | -1.905 | Destabilizing | 0.988 | D | 0.696 | prob.neutral | N | 0.503407601 | None | None | I |
P/V | 0.2385 | likely_benign | 0.2177 | benign | -1.034 | Destabilizing | 0.982 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/W | 0.8948 | likely_pathogenic | 0.8805 | pathogenic | -1.497 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/Y | 0.6651 | likely_pathogenic | 0.6404 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.