Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22385 | 67378;67379;67380 | chr2:178580134;178580133;178580132 | chr2:179444861;179444860;179444859 |
N2AB | 20744 | 62455;62456;62457 | chr2:178580134;178580133;178580132 | chr2:179444861;179444860;179444859 |
N2A | 19817 | 59674;59675;59676 | chr2:178580134;178580133;178580132 | chr2:179444861;179444860;179444859 |
N2B | 13320 | 40183;40184;40185 | chr2:178580134;178580133;178580132 | chr2:179444861;179444860;179444859 |
Novex-1 | 13445 | 40558;40559;40560 | chr2:178580134;178580133;178580132 | chr2:179444861;179444860;179444859 |
Novex-2 | 13512 | 40759;40760;40761 | chr2:178580134;178580133;178580132 | chr2:179444861;179444860;179444859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs781562260 | -0.181 | 0.988 | N | 0.604 | 0.433 | 0.343560092441 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
P/S | rs781562260 | -0.181 | 0.988 | N | 0.604 | 0.433 | 0.343560092441 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
P/S | rs781562260 | -0.181 | 0.988 | N | 0.604 | 0.433 | 0.343560092441 | gnomAD-4.0.0 | 9.29885E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18696E-05 | 0 | 1.60169E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1182 | likely_benign | 0.1206 | benign | -0.736 | Destabilizing | 0.958 | D | 0.549 | neutral | N | 0.518174944 | None | None | I |
P/C | 0.7024 | likely_pathogenic | 0.7141 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
P/D | 0.5778 | likely_pathogenic | 0.6652 | pathogenic | -0.467 | Destabilizing | 0.995 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/E | 0.3507 | ambiguous | 0.4216 | ambiguous | -0.572 | Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | I |
P/F | 0.8011 | likely_pathogenic | 0.8196 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | I |
P/G | 0.4712 | ambiguous | 0.4964 | ambiguous | -0.902 | Destabilizing | 0.991 | D | 0.607 | neutral | None | None | None | None | I |
P/H | 0.3035 | likely_benign | 0.3386 | benign | -0.422 | Destabilizing | 0.998 | D | 0.609 | neutral | N | 0.4890851 | None | None | I |
P/I | 0.5162 | ambiguous | 0.5294 | ambiguous | -0.442 | Destabilizing | 0.995 | D | 0.655 | neutral | None | None | None | None | I |
P/K | 0.3229 | likely_benign | 0.3814 | ambiguous | -0.599 | Destabilizing | 0.938 | D | 0.601 | neutral | None | None | None | None | I |
P/L | 0.2626 | likely_benign | 0.2588 | benign | -0.442 | Destabilizing | 0.988 | D | 0.659 | neutral | N | 0.491985163 | None | None | I |
P/M | 0.4891 | ambiguous | 0.4804 | ambiguous | -0.345 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | I |
P/N | 0.4054 | ambiguous | 0.4227 | ambiguous | -0.33 | Destabilizing | 0.991 | D | 0.666 | neutral | None | None | None | None | I |
P/Q | 0.2033 | likely_benign | 0.2168 | benign | -0.598 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | I |
P/R | 0.2329 | likely_benign | 0.2859 | benign | -0.022 | Destabilizing | 0.142 | N | 0.507 | neutral | N | 0.515540071 | None | None | I |
P/S | 0.1939 | likely_benign | 0.2002 | benign | -0.732 | Destabilizing | 0.988 | D | 0.604 | neutral | N | 0.49604686 | None | None | I |
P/T | 0.1756 | likely_benign | 0.1864 | benign | -0.735 | Destabilizing | 0.988 | D | 0.638 | neutral | N | 0.486589885 | None | None | I |
P/V | 0.3185 | likely_benign | 0.33 | benign | -0.504 | Destabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/W | 0.8797 | likely_pathogenic | 0.9137 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/Y | 0.7047 | likely_pathogenic | 0.7446 | pathogenic | -0.646 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.