Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22390 | 67393;67394;67395 | chr2:178580119;178580118;178580117 | chr2:179444846;179444845;179444844 |
N2AB | 20749 | 62470;62471;62472 | chr2:178580119;178580118;178580117 | chr2:179444846;179444845;179444844 |
N2A | 19822 | 59689;59690;59691 | chr2:178580119;178580118;178580117 | chr2:179444846;179444845;179444844 |
N2B | 13325 | 40198;40199;40200 | chr2:178580119;178580118;178580117 | chr2:179444846;179444845;179444844 |
Novex-1 | 13450 | 40573;40574;40575 | chr2:178580119;178580118;178580117 | chr2:179444846;179444845;179444844 |
Novex-2 | 13517 | 40774;40775;40776 | chr2:178580119;178580118;178580117 | chr2:179444846;179444845;179444844 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.247 | N | 0.493 | 0.187 | 0.495506531988 | gnomAD-4.0.0 | 6.84382E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99672E-07 | 0 | 0 |
V/M | rs778578056 | -1.226 | 0.942 | N | 0.759 | 0.256 | 0.596538173739 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs778578056 | -1.226 | 0.942 | N | 0.759 | 0.256 | 0.596538173739 | gnomAD-4.0.0 | 6.84382E-07 | None | None | None | None | N | None | 2.99097E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5995 | likely_pathogenic | 0.5737 | pathogenic | -2.306 | Highly Destabilizing | 0.822 | D | 0.617 | neutral | N | 0.474545109 | None | None | N |
V/C | 0.8634 | likely_pathogenic | 0.828 | pathogenic | -2.134 | Highly Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
V/D | 0.9103 | likely_pathogenic | 0.9013 | pathogenic | -3.254 | Highly Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
V/E | 0.7625 | likely_pathogenic | 0.7554 | pathogenic | -3.042 | Highly Destabilizing | 0.99 | D | 0.727 | prob.delet. | N | 0.511011325 | None | None | N |
V/F | 0.482 | ambiguous | 0.4764 | ambiguous | -1.317 | Destabilizing | 0.956 | D | 0.749 | deleterious | None | None | None | None | N |
V/G | 0.7951 | likely_pathogenic | 0.7892 | pathogenic | -2.817 | Highly Destabilizing | 0.971 | D | 0.765 | deleterious | N | 0.502310602 | None | None | N |
V/H | 0.8463 | likely_pathogenic | 0.8119 | pathogenic | -2.467 | Highly Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
V/I | 0.0813 | likely_benign | 0.0731 | benign | -0.872 | Destabilizing | 0.019 | N | 0.245 | neutral | None | None | None | None | N |
V/K | 0.7622 | likely_pathogenic | 0.757 | pathogenic | -1.912 | Destabilizing | 0.978 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/L | 0.4096 | ambiguous | 0.3867 | ambiguous | -0.872 | Destabilizing | 0.247 | N | 0.493 | neutral | N | 0.467820695 | None | None | N |
V/M | 0.3389 | likely_benign | 0.3004 | benign | -1.153 | Destabilizing | 0.942 | D | 0.759 | deleterious | N | 0.477876471 | None | None | N |
V/N | 0.7857 | likely_pathogenic | 0.7442 | pathogenic | -2.306 | Highly Destabilizing | 0.993 | D | 0.807 | deleterious | None | None | None | None | N |
V/P | 0.9949 | likely_pathogenic | 0.9943 | pathogenic | -1.326 | Destabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
V/Q | 0.73 | likely_pathogenic | 0.711 | pathogenic | -2.167 | Highly Destabilizing | 0.993 | D | 0.776 | deleterious | None | None | None | None | N |
V/R | 0.6462 | likely_pathogenic | 0.6643 | pathogenic | -1.686 | Destabilizing | 0.993 | D | 0.806 | deleterious | None | None | None | None | N |
V/S | 0.701 | likely_pathogenic | 0.6526 | pathogenic | -2.865 | Highly Destabilizing | 0.978 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/T | 0.4245 | ambiguous | 0.3774 | ambiguous | -2.521 | Highly Destabilizing | 0.86 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/W | 0.9526 | likely_pathogenic | 0.9471 | pathogenic | -1.832 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
V/Y | 0.8304 | likely_pathogenic | 0.8181 | pathogenic | -1.522 | Destabilizing | 0.978 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.