Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22397 | 67414;67415;67416 | chr2:178580098;178580097;178580096 | chr2:179444825;179444824;179444823 |
N2AB | 20756 | 62491;62492;62493 | chr2:178580098;178580097;178580096 | chr2:179444825;179444824;179444823 |
N2A | 19829 | 59710;59711;59712 | chr2:178580098;178580097;178580096 | chr2:179444825;179444824;179444823 |
N2B | 13332 | 40219;40220;40221 | chr2:178580098;178580097;178580096 | chr2:179444825;179444824;179444823 |
Novex-1 | 13457 | 40594;40595;40596 | chr2:178580098;178580097;178580096 | chr2:179444825;179444824;179444823 |
Novex-2 | 13524 | 40795;40796;40797 | chr2:178580098;178580097;178580096 | chr2:179444825;179444824;179444823 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.571 | 0.418 | 0.373897652646 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/G | None | None | 1.0 | N | 0.587 | 0.395 | 0.360565625551 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
E/K | rs1163846592 | None | 0.999 | N | 0.584 | 0.411 | 0.350524144436 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs1163846592 | None | 0.999 | N | 0.584 | 0.411 | 0.350524144436 | gnomAD-4.0.0 | 6.81847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32597E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2416 | likely_benign | 0.2617 | benign | -0.135 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.444869264 | None | None | N |
E/C | 0.9255 | likely_pathogenic | 0.9242 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/D | 0.1553 | likely_benign | 0.1564 | benign | -0.245 | Destabilizing | 0.999 | D | 0.439 | neutral | N | 0.419546745 | None | None | N |
E/F | 0.8921 | likely_pathogenic | 0.9 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/G | 0.211 | likely_benign | 0.2282 | benign | -0.27 | Destabilizing | 1.0 | D | 0.587 | neutral | N | 0.420122749 | None | None | N |
E/H | 0.6958 | likely_pathogenic | 0.7063 | pathogenic | 0.386 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/I | 0.6765 | likely_pathogenic | 0.6794 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/K | 0.3426 | ambiguous | 0.3728 | ambiguous | 0.413 | Stabilizing | 0.999 | D | 0.584 | neutral | N | 0.446773419 | None | None | N |
E/L | 0.5577 | ambiguous | 0.5699 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/M | 0.6782 | likely_pathogenic | 0.6883 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/N | 0.4009 | ambiguous | 0.4147 | ambiguous | 0.182 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
E/P | 0.8598 | likely_pathogenic | 0.8746 | pathogenic | 0.086 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
E/Q | 0.2285 | likely_benign | 0.2425 | benign | 0.191 | Stabilizing | 1.0 | D | 0.513 | neutral | N | 0.490236195 | None | None | N |
E/R | 0.468 | ambiguous | 0.5014 | ambiguous | 0.647 | Stabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
E/S | 0.2742 | likely_benign | 0.278 | benign | 0.02 | Stabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
E/T | 0.3277 | likely_benign | 0.3366 | benign | 0.135 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
E/V | 0.4329 | ambiguous | 0.4529 | ambiguous | 0.086 | Stabilizing | 1.0 | D | 0.64 | neutral | N | 0.489217474 | None | None | N |
E/W | 0.9563 | likely_pathogenic | 0.9605 | pathogenic | -0.053 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Y | 0.8127 | likely_pathogenic | 0.8331 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.