Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22399 | 67420;67421;67422 | chr2:178580092;178580091;178580090 | chr2:179444819;179444818;179444817 |
N2AB | 20758 | 62497;62498;62499 | chr2:178580092;178580091;178580090 | chr2:179444819;179444818;179444817 |
N2A | 19831 | 59716;59717;59718 | chr2:178580092;178580091;178580090 | chr2:179444819;179444818;179444817 |
N2B | 13334 | 40225;40226;40227 | chr2:178580092;178580091;178580090 | chr2:179444819;179444818;179444817 |
Novex-1 | 13459 | 40600;40601;40602 | chr2:178580092;178580091;178580090 | chr2:179444819;179444818;179444817 |
Novex-2 | 13526 | 40801;40802;40803 | chr2:178580092;178580091;178580090 | chr2:179444819;179444818;179444817 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1060500421 | None | 0.999 | N | 0.616 | 0.386 | 0.317084106153 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8548 | likely_pathogenic | 0.8782 | pathogenic | -0.051 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
K/C | 0.9433 | likely_pathogenic | 0.9446 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/D | 0.95 | likely_pathogenic | 0.9587 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
K/E | 0.8074 | likely_pathogenic | 0.8337 | pathogenic | -0.361 | Destabilizing | 0.999 | D | 0.616 | neutral | N | 0.506221581 | None | None | N |
K/F | 0.968 | likely_pathogenic | 0.972 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.8781 | likely_pathogenic | 0.897 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
K/H | 0.7408 | likely_pathogenic | 0.7361 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/I | 0.8034 | likely_pathogenic | 0.8487 | pathogenic | 0.138 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.483396653 | None | None | N |
K/L | 0.7507 | likely_pathogenic | 0.7643 | pathogenic | 0.138 | Stabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
K/M | 0.6888 | likely_pathogenic | 0.7102 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/N | 0.894 | likely_pathogenic | 0.9063 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.50968596 | None | None | N |
K/P | 0.8709 | likely_pathogenic | 0.9027 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
K/Q | 0.4717 | ambiguous | 0.4917 | ambiguous | -0.232 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.512726265 | None | None | N |
K/R | 0.1183 | likely_benign | 0.1214 | benign | -0.173 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.473343945 | None | None | N |
K/S | 0.9063 | likely_pathogenic | 0.9185 | pathogenic | -0.448 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
K/T | 0.7217 | likely_pathogenic | 0.7607 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.61 | neutral | N | 0.466809654 | None | None | N |
K/V | 0.785 | likely_pathogenic | 0.8222 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
K/W | 0.9622 | likely_pathogenic | 0.968 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/Y | 0.92 | likely_pathogenic | 0.9242 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.