Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22403 | 67432;67433;67434 | chr2:178580080;178580079;178580078 | chr2:179444807;179444806;179444805 |
N2AB | 20762 | 62509;62510;62511 | chr2:178580080;178580079;178580078 | chr2:179444807;179444806;179444805 |
N2A | 19835 | 59728;59729;59730 | chr2:178580080;178580079;178580078 | chr2:179444807;179444806;179444805 |
N2B | 13338 | 40237;40238;40239 | chr2:178580080;178580079;178580078 | chr2:179444807;179444806;179444805 |
Novex-1 | 13463 | 40612;40613;40614 | chr2:178580080;178580079;178580078 | chr2:179444807;179444806;179444805 |
Novex-2 | 13530 | 40813;40814;40815 | chr2:178580080;178580079;178580078 | chr2:179444807;179444806;179444805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs767363142 | -0.187 | 0.684 | N | 0.526 | 0.221 | 0.411665641125 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65837E-04 |
T/I | rs767363142 | -0.187 | 0.684 | N | 0.526 | 0.221 | 0.411665641125 | gnomAD-4.0.0 | 1.16345E-05 | None | None | None | None | N | None | 0 | 3.5783E-04 | None | 0 | 0 | None | 0 | 0 | 8.99688E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0912 | likely_benign | 0.0868 | benign | -0.644 | Destabilizing | 0.003 | N | 0.145 | neutral | N | 0.493988576 | None | None | N |
T/C | 0.499 | ambiguous | 0.41 | ambiguous | -0.402 | Destabilizing | 0.009 | N | 0.286 | neutral | None | None | None | None | N |
T/D | 0.571 | likely_pathogenic | 0.4717 | ambiguous | -0.078 | Destabilizing | 0.742 | D | 0.503 | neutral | None | None | None | None | N |
T/E | 0.4741 | ambiguous | 0.4074 | ambiguous | -0.12 | Destabilizing | 0.742 | D | 0.507 | neutral | None | None | None | None | N |
T/F | 0.4529 | ambiguous | 0.4244 | ambiguous | -0.887 | Destabilizing | 0.953 | D | 0.609 | neutral | None | None | None | None | N |
T/G | 0.4203 | ambiguous | 0.3756 | ambiguous | -0.846 | Destabilizing | 0.59 | D | 0.507 | neutral | None | None | None | None | N |
T/H | 0.5042 | ambiguous | 0.4378 | ambiguous | -1.145 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | N |
T/I | 0.1787 | likely_benign | 0.1567 | benign | -0.213 | Destabilizing | 0.684 | D | 0.526 | neutral | N | 0.517116152 | None | None | N |
T/K | 0.4958 | ambiguous | 0.4408 | ambiguous | -0.63 | Destabilizing | 0.684 | D | 0.501 | neutral | N | 0.509072672 | None | None | N |
T/L | 0.1238 | likely_benign | 0.1169 | benign | -0.213 | Destabilizing | 0.543 | D | 0.461 | neutral | None | None | None | None | N |
T/M | 0.1231 | likely_benign | 0.1113 | benign | 0.083 | Stabilizing | 0.984 | D | 0.563 | neutral | None | None | None | None | N |
T/N | 0.1907 | likely_benign | 0.1589 | benign | -0.452 | Destabilizing | 0.742 | D | 0.425 | neutral | None | None | None | None | N |
T/P | 0.1629 | likely_benign | 0.1558 | benign | -0.326 | Destabilizing | 0.939 | D | 0.564 | neutral | D | 0.524946201 | None | None | N |
T/Q | 0.415 | ambiguous | 0.3626 | ambiguous | -0.694 | Destabilizing | 0.91 | D | 0.572 | neutral | None | None | None | None | N |
T/R | 0.4175 | ambiguous | 0.3934 | ambiguous | -0.329 | Destabilizing | 0.884 | D | 0.575 | neutral | N | 0.494988654 | None | None | N |
T/S | 0.1685 | likely_benign | 0.1483 | benign | -0.715 | Destabilizing | 0.028 | N | 0.182 | neutral | N | 0.504530857 | None | None | N |
T/V | 0.1227 | likely_benign | 0.1078 | benign | -0.326 | Destabilizing | 0.59 | D | 0.349 | neutral | None | None | None | None | N |
T/W | 0.7958 | likely_pathogenic | 0.7651 | pathogenic | -0.815 | Destabilizing | 0.996 | D | 0.622 | neutral | None | None | None | None | N |
T/Y | 0.4822 | ambiguous | 0.4322 | ambiguous | -0.582 | Destabilizing | 0.984 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.