Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22405 | 67438;67439;67440 | chr2:178580074;178580073;178580072 | chr2:179444801;179444800;179444799 |
N2AB | 20764 | 62515;62516;62517 | chr2:178580074;178580073;178580072 | chr2:179444801;179444800;179444799 |
N2A | 19837 | 59734;59735;59736 | chr2:178580074;178580073;178580072 | chr2:179444801;179444800;179444799 |
N2B | 13340 | 40243;40244;40245 | chr2:178580074;178580073;178580072 | chr2:179444801;179444800;179444799 |
Novex-1 | 13465 | 40618;40619;40620 | chr2:178580074;178580073;178580072 | chr2:179444801;179444800;179444799 |
Novex-2 | 13532 | 40819;40820;40821 | chr2:178580074;178580073;178580072 | chr2:179444801;179444800;179444799 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs751337482 | -0.06 | 0.627 | N | 0.455 | 0.25 | 0.363751660372 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/I | rs751337482 | -0.06 | 0.627 | N | 0.455 | 0.25 | 0.363751660372 | gnomAD-4.0.0 | 1.36874E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31895E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1228 | likely_benign | 0.1215 | benign | -1.026 | Destabilizing | 0.001 | N | 0.113 | neutral | N | 0.47192258 | None | None | N |
T/C | 0.5498 | ambiguous | 0.4857 | ambiguous | -0.661 | Destabilizing | 0.944 | D | 0.439 | neutral | None | None | None | None | N |
T/D | 0.7167 | likely_pathogenic | 0.6956 | pathogenic | -0.22 | Destabilizing | 0.388 | N | 0.397 | neutral | None | None | None | None | N |
T/E | 0.7097 | likely_pathogenic | 0.6901 | pathogenic | -0.185 | Destabilizing | 0.241 | N | 0.411 | neutral | None | None | None | None | N |
T/F | 0.6586 | likely_pathogenic | 0.6462 | pathogenic | -1.079 | Destabilizing | 0.818 | D | 0.479 | neutral | None | None | None | None | N |
T/G | 0.4339 | ambiguous | 0.4166 | ambiguous | -1.313 | Destabilizing | 0.116 | N | 0.409 | neutral | None | None | None | None | N |
T/H | 0.6352 | likely_pathogenic | 0.6035 | pathogenic | -1.544 | Destabilizing | 0.818 | D | 0.461 | neutral | None | None | None | None | N |
T/I | 0.5572 | ambiguous | 0.4709 | ambiguous | -0.343 | Destabilizing | 0.627 | D | 0.455 | neutral | N | 0.474726601 | None | None | N |
T/K | 0.6599 | likely_pathogenic | 0.6382 | pathogenic | -0.692 | Destabilizing | 0.001 | N | 0.225 | neutral | N | 0.472902948 | None | None | N |
T/L | 0.317 | likely_benign | 0.2768 | benign | -0.343 | Destabilizing | 0.241 | N | 0.408 | neutral | None | None | None | None | N |
T/M | 0.2081 | likely_benign | 0.1789 | benign | -0.074 | Destabilizing | 0.818 | D | 0.455 | neutral | None | None | None | None | N |
T/N | 0.2911 | likely_benign | 0.2704 | benign | -0.769 | Destabilizing | 0.388 | N | 0.441 | neutral | None | None | None | None | N |
T/P | 0.8581 | likely_pathogenic | 0.8947 | pathogenic | -0.538 | Destabilizing | 0.324 | N | 0.442 | neutral | N | 0.479285731 | None | None | N |
T/Q | 0.5633 | ambiguous | 0.5342 | ambiguous | -0.868 | Destabilizing | 0.69 | D | 0.451 | neutral | None | None | None | None | N |
T/R | 0.6173 | likely_pathogenic | 0.6114 | pathogenic | -0.529 | Destabilizing | 0.193 | N | 0.44 | neutral | N | 0.479486314 | None | None | N |
T/S | 0.1509 | likely_benign | 0.1423 | benign | -1.103 | Destabilizing | 0.003 | N | 0.131 | neutral | N | 0.458721209 | None | None | N |
T/V | 0.3658 | ambiguous | 0.2967 | benign | -0.538 | Destabilizing | 0.241 | N | 0.41 | neutral | None | None | None | None | N |
T/W | 0.9254 | likely_pathogenic | 0.9264 | pathogenic | -0.991 | Destabilizing | 0.981 | D | 0.497 | neutral | None | None | None | None | N |
T/Y | 0.7124 | likely_pathogenic | 0.7031 | pathogenic | -0.746 | Destabilizing | 0.932 | D | 0.49 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.