Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22408 | 67447;67448;67449 | chr2:178580065;178580064;178580063 | chr2:179444792;179444791;179444790 |
N2AB | 20767 | 62524;62525;62526 | chr2:178580065;178580064;178580063 | chr2:179444792;179444791;179444790 |
N2A | 19840 | 59743;59744;59745 | chr2:178580065;178580064;178580063 | chr2:179444792;179444791;179444790 |
N2B | 13343 | 40252;40253;40254 | chr2:178580065;178580064;178580063 | chr2:179444792;179444791;179444790 |
Novex-1 | 13468 | 40627;40628;40629 | chr2:178580065;178580064;178580063 | chr2:179444792;179444791;179444790 |
Novex-2 | 13535 | 40828;40829;40830 | chr2:178580065;178580064;178580063 | chr2:179444792;179444791;179444790 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.97 | N | 0.779 | 0.56 | 0.806097659105 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77531E-05 | None | 0 | 0 | 0 | 0 | 0 |
C/S | None | None | 0.904 | N | 0.646 | 0.443 | 0.589282225109 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 5.66636E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7951 | likely_pathogenic | 0.8099 | pathogenic | -1.569 | Destabilizing | 0.717 | D | 0.598 | neutral | None | None | None | None | N |
C/D | 0.981 | likely_pathogenic | 0.9863 | pathogenic | -0.52 | Destabilizing | 0.993 | D | 0.759 | deleterious | None | None | None | None | N |
C/E | 0.9879 | likely_pathogenic | 0.9907 | pathogenic | -0.329 | Destabilizing | 0.978 | D | 0.769 | deleterious | None | None | None | None | N |
C/F | 0.8021 | likely_pathogenic | 0.7976 | pathogenic | -1.069 | Destabilizing | 0.89 | D | 0.665 | neutral | N | 0.489446586 | None | None | N |
C/G | 0.6894 | likely_pathogenic | 0.7452 | pathogenic | -1.912 | Destabilizing | 0.97 | D | 0.727 | prob.delet. | N | 0.517398579 | None | None | N |
C/H | 0.9591 | likely_pathogenic | 0.9663 | pathogenic | -2.136 | Highly Destabilizing | 0.988 | D | 0.773 | deleterious | None | None | None | None | N |
C/I | 0.7659 | likely_pathogenic | 0.6649 | pathogenic | -0.659 | Destabilizing | 0.956 | D | 0.654 | neutral | None | None | None | None | N |
C/K | 0.9937 | likely_pathogenic | 0.9948 | pathogenic | -0.516 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
C/L | 0.84 | likely_pathogenic | 0.7919 | pathogenic | -0.659 | Destabilizing | 0.754 | D | 0.569 | neutral | None | None | None | None | N |
C/M | 0.8873 | likely_pathogenic | 0.8668 | pathogenic | 0.081 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
C/N | 0.8307 | likely_pathogenic | 0.8694 | pathogenic | -0.899 | Destabilizing | 0.978 | D | 0.773 | deleterious | None | None | None | None | N |
C/P | 0.9859 | likely_pathogenic | 0.9889 | pathogenic | -0.938 | Destabilizing | 0.993 | D | 0.778 | deleterious | None | None | None | None | N |
C/Q | 0.9732 | likely_pathogenic | 0.9788 | pathogenic | -0.549 | Destabilizing | 0.978 | D | 0.777 | deleterious | None | None | None | None | N |
C/R | 0.9714 | likely_pathogenic | 0.9771 | pathogenic | -0.903 | Destabilizing | 0.97 | D | 0.779 | deleterious | N | 0.500746304 | None | None | N |
C/S | 0.7294 | likely_pathogenic | 0.7815 | pathogenic | -1.31 | Destabilizing | 0.904 | D | 0.646 | neutral | N | 0.472908813 | None | None | N |
C/T | 0.8137 | likely_pathogenic | 0.8042 | pathogenic | -0.915 | Destabilizing | 0.978 | D | 0.665 | neutral | None | None | None | None | N |
C/V | 0.6408 | likely_pathogenic | 0.5255 | ambiguous | -0.938 | Destabilizing | 0.86 | D | 0.63 | neutral | None | None | None | None | N |
C/W | 0.956 | likely_pathogenic | 0.9604 | pathogenic | -1.269 | Destabilizing | 0.992 | D | 0.691 | prob.neutral | D | 0.528275216 | None | None | N |
C/Y | 0.869 | likely_pathogenic | 0.8793 | pathogenic | -1.102 | Destabilizing | 0.014 | N | 0.521 | neutral | N | 0.477672207 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.