Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22410 | 67453;67454;67455 | chr2:178580059;178580058;178580057 | chr2:179444786;179444785;179444784 |
N2AB | 20769 | 62530;62531;62532 | chr2:178580059;178580058;178580057 | chr2:179444786;179444785;179444784 |
N2A | 19842 | 59749;59750;59751 | chr2:178580059;178580058;178580057 | chr2:179444786;179444785;179444784 |
N2B | 13345 | 40258;40259;40260 | chr2:178580059;178580058;178580057 | chr2:179444786;179444785;179444784 |
Novex-1 | 13470 | 40633;40634;40635 | chr2:178580059;178580058;178580057 | chr2:179444786;179444785;179444784 |
Novex-2 | 13537 | 40834;40835;40836 | chr2:178580059;178580058;178580057 | chr2:179444786;179444785;179444784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs773410270 | -0.054 | 0.983 | N | 0.609 | 0.348 | 0.237489013734 | gnomAD-4.0.0 | 3.1843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55031E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1559493839 | None | 0.967 | N | 0.61 | 0.369 | 0.373897652646 | gnomAD-4.0.0 | 1.59215E-06 | None | None | None | None | N | None | 0 | 2.28707E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6994 | likely_pathogenic | 0.737 | pathogenic | -0.078 | Destabilizing | 0.916 | D | 0.522 | neutral | None | None | None | None | N |
K/C | 0.9098 | likely_pathogenic | 0.9025 | pathogenic | -0.413 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
K/D | 0.841 | likely_pathogenic | 0.8749 | pathogenic | 0.115 | Stabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | N |
K/E | 0.529 | ambiguous | 0.6099 | pathogenic | 0.146 | Stabilizing | 0.892 | D | 0.469 | neutral | N | 0.501738481 | None | None | N |
K/F | 0.9692 | likely_pathogenic | 0.9734 | pathogenic | -0.231 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
K/G | 0.7365 | likely_pathogenic | 0.7577 | pathogenic | -0.29 | Destabilizing | 0.975 | D | 0.534 | neutral | None | None | None | None | N |
K/H | 0.6039 | likely_pathogenic | 0.575 | pathogenic | -0.467 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
K/I | 0.8313 | likely_pathogenic | 0.8665 | pathogenic | 0.409 | Stabilizing | 0.983 | D | 0.655 | neutral | N | 0.477155683 | None | None | N |
K/L | 0.7692 | likely_pathogenic | 0.7987 | pathogenic | 0.409 | Stabilizing | 0.975 | D | 0.531 | neutral | None | None | None | None | N |
K/M | 0.6784 | likely_pathogenic | 0.7221 | pathogenic | 0.042 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
K/N | 0.7893 | likely_pathogenic | 0.8184 | pathogenic | -0.002 | Destabilizing | 0.983 | D | 0.609 | neutral | N | 0.495951446 | None | None | N |
K/P | 0.9421 | likely_pathogenic | 0.961 | pathogenic | 0.275 | Stabilizing | 0.033 | N | 0.325 | neutral | None | None | None | None | N |
K/Q | 0.3442 | ambiguous | 0.3425 | ambiguous | -0.095 | Destabilizing | 0.983 | D | 0.609 | neutral | N | 0.500029114 | None | None | N |
K/R | 0.1027 | likely_benign | 0.0964 | benign | -0.11 | Destabilizing | 0.944 | D | 0.527 | neutral | N | 0.44650406 | None | None | N |
K/S | 0.7399 | likely_pathogenic | 0.7727 | pathogenic | -0.49 | Destabilizing | 0.916 | D | 0.539 | neutral | None | None | None | None | N |
K/T | 0.5214 | ambiguous | 0.5704 | pathogenic | -0.299 | Destabilizing | 0.967 | D | 0.61 | neutral | N | 0.497543382 | None | None | N |
K/V | 0.7477 | likely_pathogenic | 0.7809 | pathogenic | 0.275 | Stabilizing | 0.987 | D | 0.57 | neutral | None | None | None | None | N |
K/W | 0.9655 | likely_pathogenic | 0.9675 | pathogenic | -0.263 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Y | 0.9157 | likely_pathogenic | 0.9214 | pathogenic | 0.088 | Stabilizing | 0.996 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.