Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22417 | 67474;67475;67476 | chr2:178580038;178580037;178580036 | chr2:179444765;179444764;179444763 |
N2AB | 20776 | 62551;62552;62553 | chr2:178580038;178580037;178580036 | chr2:179444765;179444764;179444763 |
N2A | 19849 | 59770;59771;59772 | chr2:178580038;178580037;178580036 | chr2:179444765;179444764;179444763 |
N2B | 13352 | 40279;40280;40281 | chr2:178580038;178580037;178580036 | chr2:179444765;179444764;179444763 |
Novex-1 | 13477 | 40654;40655;40656 | chr2:178580038;178580037;178580036 | chr2:179444765;179444764;179444763 |
Novex-2 | 13544 | 40855;40856;40857 | chr2:178580038;178580037;178580036 | chr2:179444765;179444764;179444763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | rs769066160 | -0.43 | 0.998 | N | 0.674 | 0.411 | 0.507687591559 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/Y | rs769066160 | -0.43 | 0.998 | N | 0.674 | 0.411 | 0.507687591559 | gnomAD-4.0.0 | 1.59219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2009 | likely_benign | 0.1723 | benign | -0.161 | Destabilizing | 0.968 | D | 0.601 | neutral | None | None | None | None | N |
N/C | 0.2971 | likely_benign | 0.2464 | benign | 0.224 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/D | 0.1067 | likely_benign | 0.0951 | benign | 0.092 | Stabilizing | 0.067 | N | 0.261 | neutral | N | 0.422565621 | None | None | N |
N/E | 0.3538 | ambiguous | 0.2888 | benign | 0.032 | Stabilizing | 0.938 | D | 0.564 | neutral | None | None | None | None | N |
N/F | 0.5446 | ambiguous | 0.4803 | ambiguous | -0.717 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/G | 0.1805 | likely_benign | 0.1556 | benign | -0.269 | Destabilizing | 0.968 | D | 0.505 | neutral | None | None | None | None | N |
N/H | 0.1282 | likely_benign | 0.109 | benign | -0.267 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | N | 0.48139519 | None | None | N |
N/I | 0.36 | ambiguous | 0.2959 | benign | 0.026 | Stabilizing | 0.994 | D | 0.705 | prob.neutral | N | 0.509160684 | None | None | N |
N/K | 0.3301 | likely_benign | 0.2618 | benign | 0.132 | Stabilizing | 0.958 | D | 0.645 | neutral | N | 0.474285307 | None | None | N |
N/L | 0.2792 | likely_benign | 0.2439 | benign | 0.026 | Stabilizing | 0.995 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/M | 0.4042 | ambiguous | 0.3478 | ambiguous | 0.165 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
N/P | 0.5654 | likely_pathogenic | 0.4681 | ambiguous | -0.012 | Destabilizing | 0.995 | D | 0.648 | neutral | None | None | None | None | N |
N/Q | 0.3402 | ambiguous | 0.2747 | benign | -0.258 | Destabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/R | 0.393 | ambiguous | 0.3163 | benign | 0.222 | Stabilizing | 0.995 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/S | 0.0824 | likely_benign | 0.0776 | benign | -0.025 | Destabilizing | 0.958 | D | 0.515 | neutral | N | 0.503741423 | None | None | N |
N/T | 0.162 | likely_benign | 0.1398 | benign | 0.035 | Stabilizing | 0.958 | D | 0.641 | neutral | N | 0.483459105 | None | None | N |
N/V | 0.3002 | likely_benign | 0.2481 | benign | -0.012 | Destabilizing | 0.995 | D | 0.674 | neutral | None | None | None | None | N |
N/W | 0.7969 | likely_pathogenic | 0.7263 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/Y | 0.1974 | likely_benign | 0.1693 | benign | -0.502 | Destabilizing | 0.998 | D | 0.674 | neutral | N | 0.502323829 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.