Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22418 | 67477;67478;67479 | chr2:178580035;178580034;178580033 | chr2:179444762;179444761;179444760 |
N2AB | 20777 | 62554;62555;62556 | chr2:178580035;178580034;178580033 | chr2:179444762;179444761;179444760 |
N2A | 19850 | 59773;59774;59775 | chr2:178580035;178580034;178580033 | chr2:179444762;179444761;179444760 |
N2B | 13353 | 40282;40283;40284 | chr2:178580035;178580034;178580033 | chr2:179444762;179444761;179444760 |
Novex-1 | 13478 | 40657;40658;40659 | chr2:178580035;178580034;178580033 | chr2:179444762;179444761;179444760 |
Novex-2 | 13545 | 40858;40859;40860 | chr2:178580035;178580034;178580033 | chr2:179444762;179444761;179444760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.865 | D | 0.849 | 0.537 | 0.645408611234 | gnomAD-4.0.0 | 6.84387E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99669E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9642 | likely_pathogenic | 0.9624 | pathogenic | -2.681 | Highly Destabilizing | 0.944 | D | 0.828 | deleterious | None | None | None | None | N |
L/C | 0.9513 | likely_pathogenic | 0.9495 | pathogenic | -2.295 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -2.938 | Highly Destabilizing | 0.997 | D | 0.892 | deleterious | None | None | None | None | N |
L/E | 0.9962 | likely_pathogenic | 0.9955 | pathogenic | -2.818 | Highly Destabilizing | 0.997 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.8658 | likely_pathogenic | 0.8546 | pathogenic | -1.922 | Destabilizing | 0.085 | N | 0.657 | neutral | D | 0.659636455 | None | None | N |
L/G | 0.9933 | likely_pathogenic | 0.9917 | pathogenic | -3.143 | Highly Destabilizing | 0.992 | D | 0.881 | deleterious | None | None | None | None | N |
L/H | 0.9943 | likely_pathogenic | 0.9929 | pathogenic | -2.362 | Highly Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
L/I | 0.3786 | ambiguous | 0.3253 | benign | -1.386 | Destabilizing | 0.895 | D | 0.847 | deleterious | None | None | None | None | N |
L/K | 0.9922 | likely_pathogenic | 0.9906 | pathogenic | -2.09 | Highly Destabilizing | 0.992 | D | 0.873 | deleterious | None | None | None | None | N |
L/M | 0.4081 | ambiguous | 0.4159 | ambiguous | -1.274 | Destabilizing | 0.989 | D | 0.853 | deleterious | D | 0.614364348 | None | None | N |
L/N | 0.996 | likely_pathogenic | 0.9953 | pathogenic | -2.251 | Highly Destabilizing | 0.997 | D | 0.889 | deleterious | None | None | None | None | N |
L/P | 0.9929 | likely_pathogenic | 0.9915 | pathogenic | -1.795 | Destabilizing | 0.997 | D | 0.887 | deleterious | None | None | None | None | N |
L/Q | 0.9867 | likely_pathogenic | 0.9848 | pathogenic | -2.324 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
L/R | 0.9852 | likely_pathogenic | 0.9824 | pathogenic | -1.5 | Destabilizing | 0.992 | D | 0.879 | deleterious | None | None | None | None | N |
L/S | 0.9953 | likely_pathogenic | 0.9945 | pathogenic | -2.956 | Highly Destabilizing | 0.989 | D | 0.862 | deleterious | D | 0.685981783 | None | None | N |
L/T | 0.9495 | likely_pathogenic | 0.9416 | pathogenic | -2.698 | Highly Destabilizing | 0.992 | D | 0.858 | deleterious | None | None | None | None | N |
L/V | 0.4674 | ambiguous | 0.4167 | ambiguous | -1.795 | Destabilizing | 0.865 | D | 0.849 | deleterious | D | 0.60603678 | None | None | N |
L/W | 0.9855 | likely_pathogenic | 0.982 | pathogenic | -2.146 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | D | 0.685981783 | None | None | N |
L/Y | 0.9907 | likely_pathogenic | 0.9889 | pathogenic | -1.929 | Destabilizing | 0.968 | D | 0.852 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.