Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22419 | 67480;67481;67482 | chr2:178580032;178580031;178580030 | chr2:179444759;179444758;179444757 |
N2AB | 20778 | 62557;62558;62559 | chr2:178580032;178580031;178580030 | chr2:179444759;179444758;179444757 |
N2A | 19851 | 59776;59777;59778 | chr2:178580032;178580031;178580030 | chr2:179444759;179444758;179444757 |
N2B | 13354 | 40285;40286;40287 | chr2:178580032;178580031;178580030 | chr2:179444759;179444758;179444757 |
Novex-1 | 13479 | 40660;40661;40662 | chr2:178580032;178580031;178580030 | chr2:179444759;179444758;179444757 |
Novex-2 | 13546 | 40861;40862;40863 | chr2:178580032;178580031;178580030 | chr2:179444759;179444758;179444757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.722 | N | 0.455 | 0.124 | 0.132336055621 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
E/Q | rs1460379508 | -0.314 | 0.949 | N | 0.526 | 0.248 | 0.231231049324 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs1460379508 | -0.314 | 0.949 | N | 0.526 | 0.248 | 0.231231049324 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02627E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2453 | likely_benign | 0.2121 | benign | -0.51 | Destabilizing | 0.565 | D | 0.536 | neutral | N | 0.478789837 | None | None | N |
E/C | 0.89 | likely_pathogenic | 0.8445 | pathogenic | -0.329 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/D | 0.2463 | likely_benign | 0.1932 | benign | -0.639 | Destabilizing | 0.722 | D | 0.455 | neutral | N | 0.505264362 | None | None | N |
E/F | 0.8911 | likely_pathogenic | 0.8491 | pathogenic | 0.066 | Stabilizing | 0.961 | D | 0.645 | neutral | None | None | None | None | N |
E/G | 0.3207 | likely_benign | 0.2712 | benign | -0.8 | Destabilizing | 0.008 | N | 0.277 | neutral | N | 0.506833734 | None | None | N |
E/H | 0.6993 | likely_pathogenic | 0.5935 | pathogenic | 0.291 | Stabilizing | 0.996 | D | 0.534 | neutral | None | None | None | None | N |
E/I | 0.4531 | ambiguous | 0.366 | ambiguous | 0.257 | Stabilizing | 0.923 | D | 0.651 | neutral | None | None | None | None | N |
E/K | 0.3453 | ambiguous | 0.2737 | benign | 0.075 | Stabilizing | 0.722 | D | 0.503 | neutral | N | 0.451293804 | None | None | N |
E/L | 0.4781 | ambiguous | 0.3917 | ambiguous | 0.257 | Stabilizing | 0.858 | D | 0.544 | neutral | None | None | None | None | N |
E/M | 0.5927 | likely_pathogenic | 0.518 | ambiguous | 0.323 | Stabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | N |
E/N | 0.5041 | ambiguous | 0.4209 | ambiguous | -0.557 | Destabilizing | 0.923 | D | 0.499 | neutral | None | None | None | None | N |
E/P | 0.7898 | likely_pathogenic | 0.7403 | pathogenic | 0.022 | Stabilizing | 0.961 | D | 0.595 | neutral | None | None | None | None | N |
E/Q | 0.208 | likely_benign | 0.172 | benign | -0.441 | Destabilizing | 0.949 | D | 0.526 | neutral | N | 0.430419887 | None | None | N |
E/R | 0.4632 | ambiguous | 0.3798 | ambiguous | 0.468 | Stabilizing | 0.923 | D | 0.53 | neutral | None | None | None | None | N |
E/S | 0.3664 | ambiguous | 0.2987 | benign | -0.735 | Destabilizing | 0.633 | D | 0.481 | neutral | None | None | None | None | N |
E/T | 0.3235 | likely_benign | 0.2656 | benign | -0.48 | Destabilizing | 0.011 | N | 0.321 | neutral | None | None | None | None | N |
E/V | 0.2589 | likely_benign | 0.2082 | benign | 0.022 | Stabilizing | 0.82 | D | 0.487 | neutral | N | 0.439636803 | None | None | N |
E/W | 0.9553 | likely_pathogenic | 0.9366 | pathogenic | 0.353 | Stabilizing | 0.996 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.8177 | likely_pathogenic | 0.7563 | pathogenic | 0.348 | Stabilizing | 0.987 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.