Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22428 | 67507;67508;67509 | chr2:178580005;178580004;178580003 | chr2:179444732;179444731;179444730 |
N2AB | 20787 | 62584;62585;62586 | chr2:178580005;178580004;178580003 | chr2:179444732;179444731;179444730 |
N2A | 19860 | 59803;59804;59805 | chr2:178580005;178580004;178580003 | chr2:179444732;179444731;179444730 |
N2B | 13363 | 40312;40313;40314 | chr2:178580005;178580004;178580003 | chr2:179444732;179444731;179444730 |
Novex-1 | 13488 | 40687;40688;40689 | chr2:178580005;178580004;178580003 | chr2:179444732;179444731;179444730 |
Novex-2 | 13555 | 40888;40889;40890 | chr2:178580005;178580004;178580003 | chr2:179444732;179444731;179444730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs794729483 | -0.87 | 0.034 | D | 0.547 | 0.371 | 0.489104616352 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/L | rs794729483 | -0.87 | 0.034 | D | 0.547 | 0.371 | 0.489104616352 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs794729483 | -0.87 | 0.034 | D | 0.547 | 0.371 | 0.489104616352 | gnomAD-4.0.0 | 8.67838E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18692E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9351 | likely_pathogenic | 0.9246 | pathogenic | -2.591 | Highly Destabilizing | 0.007 | N | 0.335 | neutral | D | 0.569760776 | None | None | N |
V/C | 0.9695 | likely_pathogenic | 0.9558 | pathogenic | -1.736 | Destabilizing | 0.982 | D | 0.755 | deleterious | None | None | None | None | N |
V/D | 0.9979 | likely_pathogenic | 0.9987 | pathogenic | -3.395 | Highly Destabilizing | 0.826 | D | 0.894 | deleterious | None | None | None | None | N |
V/E | 0.995 | likely_pathogenic | 0.9968 | pathogenic | -3.091 | Highly Destabilizing | 0.781 | D | 0.843 | deleterious | D | 0.658039918 | None | None | N |
V/F | 0.955 | likely_pathogenic | 0.9418 | pathogenic | -1.534 | Destabilizing | 0.7 | D | 0.743 | deleterious | None | None | None | None | N |
V/G | 0.9437 | likely_pathogenic | 0.9557 | pathogenic | -3.133 | Highly Destabilizing | 0.638 | D | 0.829 | deleterious | D | 0.658039918 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -2.907 | Highly Destabilizing | 0.982 | D | 0.883 | deleterious | None | None | None | None | N |
V/I | 0.132 | likely_benign | 0.1096 | benign | -0.981 | Destabilizing | 0.002 | N | 0.282 | neutral | None | None | None | None | N |
V/K | 0.9965 | likely_pathogenic | 0.9976 | pathogenic | -2.103 | Highly Destabilizing | 0.826 | D | 0.849 | deleterious | None | None | None | None | N |
V/L | 0.8745 | likely_pathogenic | 0.8228 | pathogenic | -0.981 | Destabilizing | 0.034 | N | 0.547 | neutral | D | 0.536244383 | None | None | N |
V/M | 0.9337 | likely_pathogenic | 0.9054 | pathogenic | -1.196 | Destabilizing | 0.638 | D | 0.667 | neutral | D | 0.55865796 | None | None | N |
V/N | 0.9921 | likely_pathogenic | 0.994 | pathogenic | -2.802 | Highly Destabilizing | 0.935 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9963 | likely_pathogenic | 0.9965 | pathogenic | -1.506 | Destabilizing | 0.826 | D | 0.863 | deleterious | None | None | None | None | N |
V/Q | 0.9954 | likely_pathogenic | 0.9966 | pathogenic | -2.453 | Highly Destabilizing | 0.935 | D | 0.891 | deleterious | None | None | None | None | N |
V/R | 0.9914 | likely_pathogenic | 0.9943 | pathogenic | -2.167 | Highly Destabilizing | 0.826 | D | 0.904 | deleterious | None | None | None | None | N |
V/S | 0.9755 | likely_pathogenic | 0.9785 | pathogenic | -3.204 | Highly Destabilizing | 0.539 | D | 0.8 | deleterious | None | None | None | None | N |
V/T | 0.9503 | likely_pathogenic | 0.9506 | pathogenic | -2.762 | Highly Destabilizing | 0.399 | N | 0.602 | neutral | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.971 | Destabilizing | 0.982 | D | 0.85 | deleterious | None | None | None | None | N |
V/Y | 0.9946 | likely_pathogenic | 0.9944 | pathogenic | -1.784 | Destabilizing | 0.826 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.