Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22434 | 67525;67526;67527 | chr2:178579987;178579986;178579985 | chr2:179444714;179444713;179444712 |
N2AB | 20793 | 62602;62603;62604 | chr2:178579987;178579986;178579985 | chr2:179444714;179444713;179444712 |
N2A | 19866 | 59821;59822;59823 | chr2:178579987;178579986;178579985 | chr2:179444714;179444713;179444712 |
N2B | 13369 | 40330;40331;40332 | chr2:178579987;178579986;178579985 | chr2:179444714;179444713;179444712 |
Novex-1 | 13494 | 40705;40706;40707 | chr2:178579987;178579986;178579985 | chr2:179444714;179444713;179444712 |
Novex-2 | 13561 | 40906;40907;40908 | chr2:178579987;178579986;178579985 | chr2:179444714;179444713;179444712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | rs1553623044 | None | 1.0 | N | 0.767 | 0.509 | 0.364926071151 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/N | rs1553623044 | None | 1.0 | N | 0.767 | 0.509 | 0.364926071151 | gnomAD-4.0.0 | 2.56399E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9257 | likely_pathogenic | 0.9297 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
Y/C | 0.5667 | likely_pathogenic | 0.6406 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.795 | deleterious | N | 0.470861806 | None | None | I |
Y/D | 0.9206 | likely_pathogenic | 0.9387 | pathogenic | 0.885 | Stabilizing | 1.0 | D | 0.752 | deleterious | N | 0.497787471 | None | None | I |
Y/E | 0.9707 | likely_pathogenic | 0.9772 | pathogenic | 0.866 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
Y/F | 0.1238 | likely_benign | 0.1284 | benign | -0.505 | Destabilizing | 0.999 | D | 0.49 | neutral | N | 0.472111794 | None | None | I |
Y/G | 0.9353 | likely_pathogenic | 0.9361 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
Y/H | 0.6809 | likely_pathogenic | 0.7307 | pathogenic | 0.128 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.472556872 | None | None | I |
Y/I | 0.6673 | likely_pathogenic | 0.7288 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
Y/K | 0.9571 | likely_pathogenic | 0.9703 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
Y/L | 0.7554 | likely_pathogenic | 0.7826 | pathogenic | -0.401 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
Y/M | 0.8195 | likely_pathogenic | 0.8467 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
Y/N | 0.6463 | likely_pathogenic | 0.6841 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.519478879 | None | None | I |
Y/P | 0.9962 | likely_pathogenic | 0.9965 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
Y/Q | 0.9448 | likely_pathogenic | 0.9591 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
Y/R | 0.9259 | likely_pathogenic | 0.9438 | pathogenic | 0.497 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
Y/S | 0.8719 | likely_pathogenic | 0.8948 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.476088818 | None | None | I |
Y/T | 0.9301 | likely_pathogenic | 0.9439 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
Y/V | 0.6659 | likely_pathogenic | 0.7195 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
Y/W | 0.7041 | likely_pathogenic | 0.7279 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.