Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22436 | 67531;67532;67533 | chr2:178579981;178579980;178579979 | chr2:179444708;179444707;179444706 |
N2AB | 20795 | 62608;62609;62610 | chr2:178579981;178579980;178579979 | chr2:179444708;179444707;179444706 |
N2A | 19868 | 59827;59828;59829 | chr2:178579981;178579980;178579979 | chr2:179444708;179444707;179444706 |
N2B | 13371 | 40336;40337;40338 | chr2:178579981;178579980;178579979 | chr2:179444708;179444707;179444706 |
Novex-1 | 13496 | 40711;40712;40713 | chr2:178579981;178579980;178579979 | chr2:179444708;179444707;179444706 |
Novex-2 | 13563 | 40912;40913;40914 | chr2:178579981;178579980;178579979 | chr2:179444708;179444707;179444706 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs777418071 | -1.278 | 0.892 | N | 0.686 | 0.244 | 0.584551062954 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 1.78E-05 | 0 |
I/T | rs777418071 | -1.278 | 0.892 | N | 0.686 | 0.244 | 0.584551062954 | gnomAD-4.0.0 | 1.23195E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34951E-05 | 3.47858E-05 | 0 |
I/V | None | None | 0.011 | N | 0.247 | 0.116 | 0.255270683199 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8602E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3398 | likely_benign | 0.3142 | benign | -1.457 | Destabilizing | 0.845 | D | 0.608 | neutral | None | None | None | None | I |
I/C | 0.7274 | likely_pathogenic | 0.699 | pathogenic | -1.11 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
I/D | 0.8499 | likely_pathogenic | 0.8575 | pathogenic | -0.284 | Destabilizing | 0.996 | D | 0.818 | deleterious | None | None | None | None | I |
I/E | 0.6638 | likely_pathogenic | 0.6899 | pathogenic | -0.286 | Destabilizing | 0.987 | D | 0.814 | deleterious | None | None | None | None | I |
I/F | 0.2504 | likely_benign | 0.2538 | benign | -1.018 | Destabilizing | 0.967 | D | 0.76 | deleterious | N | 0.480901438 | None | None | I |
I/G | 0.791 | likely_pathogenic | 0.7728 | pathogenic | -1.753 | Destabilizing | 0.987 | D | 0.807 | deleterious | None | None | None | None | I |
I/H | 0.7284 | likely_pathogenic | 0.7298 | pathogenic | -0.786 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | I |
I/K | 0.4916 | ambiguous | 0.5338 | ambiguous | -0.74 | Destabilizing | 0.987 | D | 0.812 | deleterious | None | None | None | None | I |
I/L | 0.1533 | likely_benign | 0.148 | benign | -0.736 | Destabilizing | 0.426 | N | 0.324 | neutral | N | 0.492428351 | None | None | I |
I/M | 0.1376 | likely_benign | 0.1304 | benign | -0.713 | Destabilizing | 0.983 | D | 0.755 | deleterious | N | 0.501799983 | None | None | I |
I/N | 0.4771 | ambiguous | 0.493 | ambiguous | -0.588 | Destabilizing | 0.994 | D | 0.822 | deleterious | N | 0.48135551 | None | None | I |
I/P | 0.6806 | likely_pathogenic | 0.6475 | pathogenic | -0.944 | Destabilizing | 0.996 | D | 0.823 | deleterious | None | None | None | None | I |
I/Q | 0.5668 | likely_pathogenic | 0.5831 | pathogenic | -0.752 | Destabilizing | 0.996 | D | 0.82 | deleterious | None | None | None | None | I |
I/R | 0.3779 | ambiguous | 0.4324 | ambiguous | -0.188 | Destabilizing | 0.987 | D | 0.822 | deleterious | None | None | None | None | I |
I/S | 0.4099 | ambiguous | 0.4138 | ambiguous | -1.321 | Destabilizing | 0.983 | D | 0.779 | deleterious | N | 0.521057747 | None | None | I |
I/T | 0.1803 | likely_benign | 0.1708 | benign | -1.195 | Destabilizing | 0.892 | D | 0.686 | prob.neutral | N | 0.496007374 | None | None | I |
I/V | 0.0868 | likely_benign | 0.0789 | benign | -0.944 | Destabilizing | 0.011 | N | 0.247 | neutral | N | 0.431630608 | None | None | I |
I/W | 0.8593 | likely_pathogenic | 0.8756 | pathogenic | -0.972 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | I |
I/Y | 0.6531 | likely_pathogenic | 0.6837 | pathogenic | -0.759 | Destabilizing | 0.987 | D | 0.765 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.