Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22439 | 67540;67541;67542 | chr2:178579972;178579971;178579970 | chr2:179444699;179444698;179444697 |
N2AB | 20798 | 62617;62618;62619 | chr2:178579972;178579971;178579970 | chr2:179444699;179444698;179444697 |
N2A | 19871 | 59836;59837;59838 | chr2:178579972;178579971;178579970 | chr2:179444699;179444698;179444697 |
N2B | 13374 | 40345;40346;40347 | chr2:178579972;178579971;178579970 | chr2:179444699;179444698;179444697 |
Novex-1 | 13499 | 40720;40721;40722 | chr2:178579972;178579971;178579970 | chr2:179444699;179444698;179444697 |
Novex-2 | 13566 | 40921;40922;40923 | chr2:178579972;178579971;178579970 | chr2:179444699;179444698;179444697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs987188592 | None | 0.9 | N | 0.531 | 0.241 | 0.313818047136 | gnomAD-4.0.0 | 1.59262E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86036E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.094 | likely_benign | 0.0819 | benign | -1.565 | Destabilizing | 0.9 | D | 0.531 | neutral | N | 0.47378464 | None | None | I |
P/C | 0.6169 | likely_pathogenic | 0.5722 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
P/D | 0.8991 | likely_pathogenic | 0.8945 | pathogenic | -1.469 | Destabilizing | 0.998 | D | 0.596 | neutral | None | None | None | None | I |
P/E | 0.7225 | likely_pathogenic | 0.7238 | pathogenic | -1.429 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
P/F | 0.7494 | likely_pathogenic | 0.7115 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/G | 0.4805 | ambiguous | 0.4004 | ambiguous | -1.917 | Destabilizing | 0.071 | N | 0.487 | neutral | None | None | None | None | I |
P/H | 0.6141 | likely_pathogenic | 0.5873 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | D | 0.538203171 | None | None | I |
P/I | 0.6697 | likely_pathogenic | 0.692 | pathogenic | -0.679 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
P/K | 0.83 | likely_pathogenic | 0.8457 | pathogenic | -1.231 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | I |
P/L | 0.4724 | ambiguous | 0.5036 | ambiguous | -0.679 | Destabilizing | 0.997 | D | 0.722 | prob.delet. | D | 0.535921765 | None | None | I |
P/M | 0.6567 | likely_pathogenic | 0.6488 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/N | 0.8269 | likely_pathogenic | 0.8082 | pathogenic | -1.089 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
P/Q | 0.5767 | likely_pathogenic | 0.5735 | pathogenic | -1.221 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
P/R | 0.6952 | likely_pathogenic | 0.7242 | pathogenic | -0.727 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.522212056 | None | None | I |
P/S | 0.2796 | likely_benign | 0.2404 | benign | -1.626 | Destabilizing | 0.978 | D | 0.529 | neutral | N | 0.509930698 | None | None | I |
P/T | 0.312 | likely_benign | 0.319 | benign | -1.481 | Destabilizing | 0.997 | D | 0.593 | neutral | N | 0.519338447 | None | None | I |
P/V | 0.5004 | ambiguous | 0.5183 | ambiguous | -0.941 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | I |
P/W | 0.8926 | likely_pathogenic | 0.8815 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/Y | 0.7702 | likely_pathogenic | 0.7521 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.