Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2244 | 6955;6956;6957 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
N2AB | 2244 | 6955;6956;6957 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
N2A | 2244 | 6955;6956;6957 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
N2B | 2198 | 6817;6818;6819 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
Novex-1 | 2198 | 6817;6818;6819 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
Novex-2 | 2198 | 6817;6818;6819 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
Novex-3 | 2244 | 6955;6956;6957 | chr2:178774981;178774980;178774979 | chr2:179639708;179639707;179639706 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.869 | 0.426 | 0.427713192076 | gnomAD-4.0.0 | 8.40229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18756E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9886 | likely_pathogenic | 0.9899 | pathogenic | -2.7 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
Y/C | 0.8495 | likely_pathogenic | 0.8626 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.632902824 | None | None | N |
Y/D | 0.9956 | likely_pathogenic | 0.996 | pathogenic | -3.473 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.632902824 | None | None | N |
Y/E | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -3.23 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/F | 0.0905 | likely_benign | 0.0975 | benign | -1.092 | Destabilizing | 0.434 | N | 0.413 | neutral | N | 0.509040805 | None | None | N |
Y/G | 0.9882 | likely_pathogenic | 0.9888 | pathogenic | -3.142 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/H | 0.9356 | likely_pathogenic | 0.9411 | pathogenic | -2.414 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.632902824 | None | None | N |
Y/I | 0.7536 | likely_pathogenic | 0.7781 | pathogenic | -1.218 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
Y/K | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/L | 0.765 | likely_pathogenic | 0.779 | pathogenic | -1.218 | Destabilizing | 0.994 | D | 0.766 | deleterious | None | None | None | None | N |
Y/M | 0.9392 | likely_pathogenic | 0.9463 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Y/N | 0.9727 | likely_pathogenic | 0.9748 | pathogenic | -3.177 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.632902824 | None | None | N |
Y/P | 0.9983 | likely_pathogenic | 0.9983 | pathogenic | -1.731 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/Q | 0.9969 | likely_pathogenic | 0.9971 | pathogenic | -2.749 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Y/R | 0.988 | likely_pathogenic | 0.9889 | pathogenic | -2.382 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/S | 0.9745 | likely_pathogenic | 0.9766 | pathogenic | -3.392 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.632902824 | None | None | N |
Y/T | 0.9813 | likely_pathogenic | 0.9835 | pathogenic | -3.005 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/V | 0.7224 | likely_pathogenic | 0.746 | pathogenic | -1.731 | Destabilizing | 0.997 | D | 0.789 | deleterious | None | None | None | None | N |
Y/W | 0.8042 | likely_pathogenic | 0.8125 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.