Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22441 | 67546;67547;67548 | chr2:178579966;178579965;178579964 | chr2:179444693;179444692;179444691 |
N2AB | 20800 | 62623;62624;62625 | chr2:178579966;178579965;178579964 | chr2:179444693;179444692;179444691 |
N2A | 19873 | 59842;59843;59844 | chr2:178579966;178579965;178579964 | chr2:179444693;179444692;179444691 |
N2B | 13376 | 40351;40352;40353 | chr2:178579966;178579965;178579964 | chr2:179444693;179444692;179444691 |
Novex-1 | 13501 | 40726;40727;40728 | chr2:178579966;178579965;178579964 | chr2:179444693;179444692;179444691 |
Novex-2 | 13568 | 40927;40928;40929 | chr2:178579966;178579965;178579964 | chr2:179444693;179444692;179444691 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs201223583 | -0.93 | 0.999 | N | 0.695 | 0.533 | None | gnomAD-2.1.1 | 5.24E-05 | None | None | None | None | N | None | 6.46E-05 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-05 | 1.66223E-04 |
E/G | rs201223583 | -0.93 | 0.999 | N | 0.695 | 0.533 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.17696E-04 | 0 | 0 |
E/G | rs201223583 | -0.93 | 0.999 | N | 0.695 | 0.533 | None | gnomAD-4.0.0 | 1.34525E-04 | None | None | None | None | N | None | 0 | 1.66795E-05 | None | 0 | 0 | None | 0 | 1.64636E-04 | 1.68718E-04 | 0 | 2.56271E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5422 | ambiguous | 0.5267 | ambiguous | -0.494 | Destabilizing | 0.997 | D | 0.776 | deleterious | N | 0.481062341 | None | None | N |
E/C | 0.9552 | likely_pathogenic | 0.9485 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/D | 0.3413 | ambiguous | 0.2848 | benign | -1.087 | Destabilizing | 0.997 | D | 0.748 | deleterious | N | 0.476049138 | None | None | N |
E/F | 0.9201 | likely_pathogenic | 0.9134 | pathogenic | 0.413 | Stabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
E/G | 0.6692 | likely_pathogenic | 0.6629 | pathogenic | -0.927 | Destabilizing | 0.999 | D | 0.695 | prob.delet. | N | 0.504410516 | None | None | N |
E/H | 0.8528 | likely_pathogenic | 0.8382 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/I | 0.6594 | likely_pathogenic | 0.6369 | pathogenic | 0.707 | Stabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
E/K | 0.5507 | ambiguous | 0.5676 | pathogenic | -0.42 | Destabilizing | 0.997 | D | 0.805 | deleterious | N | 0.492040253 | None | None | N |
E/L | 0.7911 | likely_pathogenic | 0.7791 | pathogenic | 0.707 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/M | 0.7486 | likely_pathogenic | 0.7299 | pathogenic | 1.091 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/N | 0.7051 | likely_pathogenic | 0.6639 | pathogenic | -1.102 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
E/P | 0.9739 | likely_pathogenic | 0.9784 | pathogenic | 0.329 | Stabilizing | 0.999 | D | 0.739 | deleterious | None | None | None | None | N |
E/Q | 0.3635 | ambiguous | 0.3498 | ambiguous | -0.882 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.482836768 | None | None | N |
E/R | 0.729 | likely_pathogenic | 0.7501 | pathogenic | -0.087 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
E/S | 0.5885 | likely_pathogenic | 0.5528 | ambiguous | -1.457 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
E/T | 0.6029 | likely_pathogenic | 0.5714 | pathogenic | -1.079 | Destabilizing | 0.999 | D | 0.707 | prob.delet. | None | None | None | None | N |
E/V | 0.4985 | ambiguous | 0.477 | ambiguous | 0.329 | Stabilizing | 0.999 | D | 0.731 | deleterious | N | 0.490243054 | None | None | N |
E/W | 0.9781 | likely_pathogenic | 0.9788 | pathogenic | 0.682 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.8975 | likely_pathogenic | 0.8872 | pathogenic | 0.703 | Stabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.