Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22444 | 67555;67556;67557 | chr2:178579957;178579956;178579955 | chr2:179444684;179444683;179444682 |
N2AB | 20803 | 62632;62633;62634 | chr2:178579957;178579956;178579955 | chr2:179444684;179444683;179444682 |
N2A | 19876 | 59851;59852;59853 | chr2:178579957;178579956;178579955 | chr2:179444684;179444683;179444682 |
N2B | 13379 | 40360;40361;40362 | chr2:178579957;178579956;178579955 | chr2:179444684;179444683;179444682 |
Novex-1 | 13504 | 40735;40736;40737 | chr2:178579957;178579956;178579955 | chr2:179444684;179444683;179444682 |
Novex-2 | 13571 | 40936;40937;40938 | chr2:178579957;178579956;178579955 | chr2:179444684;179444683;179444682 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.919 | N | 0.441 | 0.17 | 0.297031009988 | gnomAD-4.0.0 | 6.84463E-07 | None | None | None | None | N | None | 0 | 0 | None | 3.83024E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.204 | likely_benign | 0.1635 | benign | -0.115 | Destabilizing | 0.851 | D | 0.549 | neutral | N | 0.51759058 | None | None | N |
D/C | 0.6423 | likely_pathogenic | 0.5444 | ambiguous | -0.258 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
D/E | 0.1376 | likely_benign | 0.1126 | benign | -0.242 | Destabilizing | 0.919 | D | 0.441 | neutral | N | 0.38902905 | None | None | N |
D/F | 0.5909 | likely_pathogenic | 0.5064 | ambiguous | -0.042 | Destabilizing | 0.997 | D | 0.765 | deleterious | None | None | None | None | N |
D/G | 0.1949 | likely_benign | 0.1686 | benign | -0.262 | Destabilizing | 0.015 | N | 0.316 | neutral | N | 0.493676358 | None | None | N |
D/H | 0.3494 | ambiguous | 0.2785 | benign | 0.534 | Stabilizing | 0.988 | D | 0.538 | neutral | N | 0.488353268 | None | None | N |
D/I | 0.3619 | ambiguous | 0.2891 | benign | 0.217 | Stabilizing | 0.997 | D | 0.765 | deleterious | None | None | None | None | N |
D/K | 0.4478 | ambiguous | 0.3726 | ambiguous | 0.312 | Stabilizing | 0.938 | D | 0.56 | neutral | None | None | None | None | N |
D/L | 0.3726 | ambiguous | 0.3121 | benign | 0.217 | Stabilizing | 0.991 | D | 0.745 | deleterious | None | None | None | None | N |
D/M | 0.6141 | likely_pathogenic | 0.5112 | ambiguous | 0.013 | Stabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
D/N | 0.1431 | likely_benign | 0.1174 | benign | -0.023 | Destabilizing | 0.034 | N | 0.227 | neutral | N | 0.503853279 | None | None | N |
D/P | 0.804 | likely_pathogenic | 0.768 | pathogenic | 0.127 | Stabilizing | 0.997 | D | 0.57 | neutral | None | None | None | None | N |
D/Q | 0.3775 | ambiguous | 0.3043 | benign | 0.013 | Stabilizing | 0.991 | D | 0.487 | neutral | None | None | None | None | N |
D/R | 0.5101 | ambiguous | 0.4406 | ambiguous | 0.619 | Stabilizing | 0.981 | D | 0.743 | deleterious | None | None | None | None | N |
D/S | 0.1882 | likely_benign | 0.1518 | benign | -0.121 | Destabilizing | 0.883 | D | 0.397 | neutral | None | None | None | None | N |
D/T | 0.2724 | likely_benign | 0.2098 | benign | 0.005 | Stabilizing | 0.938 | D | 0.581 | neutral | None | None | None | None | N |
D/V | 0.1942 | likely_benign | 0.1578 | benign | 0.127 | Stabilizing | 0.988 | D | 0.745 | deleterious | N | 0.474969047 | None | None | N |
D/W | 0.8673 | likely_pathogenic | 0.8328 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
D/Y | 0.2116 | likely_benign | 0.1839 | benign | 0.193 | Stabilizing | 0.996 | D | 0.754 | deleterious | N | 0.498695616 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.