Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22447 | 67564;67565;67566 | chr2:178579948;178579947;178579946 | chr2:179444675;179444674;179444673 |
N2AB | 20806 | 62641;62642;62643 | chr2:178579948;178579947;178579946 | chr2:179444675;179444674;179444673 |
N2A | 19879 | 59860;59861;59862 | chr2:178579948;178579947;178579946 | chr2:179444675;179444674;179444673 |
N2B | 13382 | 40369;40370;40371 | chr2:178579948;178579947;178579946 | chr2:179444675;179444674;179444673 |
Novex-1 | 13507 | 40744;40745;40746 | chr2:178579948;178579947;178579946 | chr2:179444675;179444674;179444673 |
Novex-2 | 13574 | 40945;40946;40947 | chr2:178579948;178579947;178579946 | chr2:179444675;179444674;179444673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs766331736 | 0.343 | 0.029 | N | 0.197 | 0.093 | 0.250039746154 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
K/R | rs766331736 | 0.343 | 0.029 | N | 0.197 | 0.093 | 0.250039746154 | gnomAD-4.0.0 | 4.77812E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86049E-06 | 0 | 6.05437E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7449 | likely_pathogenic | 0.6826 | pathogenic | -0.161 | Destabilizing | 0.984 | D | 0.587 | neutral | None | None | None | None | N |
K/C | 0.8836 | likely_pathogenic | 0.8268 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/D | 0.9535 | likely_pathogenic | 0.9373 | pathogenic | 0.49 | Stabilizing | 0.995 | D | 0.608 | neutral | None | None | None | None | N |
K/E | 0.6199 | likely_pathogenic | 0.5595 | ambiguous | 0.508 | Stabilizing | 0.958 | D | 0.556 | neutral | N | 0.481208493 | None | None | N |
K/F | 0.9234 | likely_pathogenic | 0.8993 | pathogenic | -0.414 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
K/G | 0.9048 | likely_pathogenic | 0.8694 | pathogenic | -0.358 | Destabilizing | 0.984 | D | 0.603 | neutral | None | None | None | None | N |
K/H | 0.6207 | likely_pathogenic | 0.5354 | ambiguous | -0.676 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/I | 0.5117 | ambiguous | 0.4686 | ambiguous | 0.279 | Stabilizing | 0.998 | D | 0.809 | deleterious | N | 0.475743958 | None | None | N |
K/L | 0.5613 | ambiguous | 0.5157 | ambiguous | 0.279 | Stabilizing | 0.984 | D | 0.603 | neutral | None | None | None | None | N |
K/M | 0.4385 | ambiguous | 0.3963 | ambiguous | 0.17 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/N | 0.8714 | likely_pathogenic | 0.8411 | pathogenic | 0.23 | Stabilizing | 0.994 | D | 0.571 | neutral | N | 0.461766317 | None | None | N |
K/P | 0.9059 | likely_pathogenic | 0.878 | pathogenic | 0.16 | Stabilizing | 0.998 | D | 0.699 | prob.delet. | None | None | None | None | N |
K/Q | 0.3469 | ambiguous | 0.2933 | benign | 0.057 | Stabilizing | 0.988 | D | 0.6 | neutral | N | 0.498890176 | None | None | N |
K/R | 0.0962 | likely_benign | 0.0882 | benign | 0.012 | Stabilizing | 0.029 | N | 0.197 | neutral | N | 0.437399001 | None | None | N |
K/S | 0.8712 | likely_pathogenic | 0.8286 | pathogenic | -0.4 | Destabilizing | 0.984 | D | 0.527 | neutral | None | None | None | None | N |
K/T | 0.4033 | ambiguous | 0.3503 | ambiguous | -0.22 | Destabilizing | 0.979 | D | 0.644 | neutral | N | 0.412910696 | None | None | N |
K/V | 0.4854 | ambiguous | 0.4342 | ambiguous | 0.16 | Stabilizing | 0.995 | D | 0.593 | neutral | None | None | None | None | N |
K/W | 0.923 | likely_pathogenic | 0.8918 | pathogenic | -0.365 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/Y | 0.8714 | likely_pathogenic | 0.8306 | pathogenic | None | Stabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.