Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22450 | 67573;67574;67575 | chr2:178579939;178579848;178579847 | chr2:179444666;179444575;179444574 |
N2AB | 20809 | 62650;62651;62652 | chr2:178579939;178579848;178579847 | chr2:179444666;179444575;179444574 |
N2A | 19882 | 59869;59870;59871 | chr2:178579939;178579848;178579847 | chr2:179444666;179444575;179444574 |
N2B | 13385 | 40378;40379;40380 | chr2:178579939;178579848;178579847 | chr2:179444666;179444575;179444574 |
Novex-1 | 13510 | 40753;40754;40755 | chr2:178579939;178579848;178579847 | chr2:179444666;179444575;179444574 |
Novex-2 | 13577 | 40954;40955;40956 | chr2:178579939;178579848;178579847 | chr2:179444666;179444575;179444574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.004 | N | 0.227 | 0.037 | 0.0954503805726 | gnomAD-4.0.0 | 6.84565E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99721E-07 | 0 | 0 |
Q/P | None | None | 0.013 | N | 0.373 | None | 0.220303561663 | gnomAD-4.0.0 | 1.59425E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77654E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2433 | likely_benign | 0.2422 | benign | -0.163 | Destabilizing | 0.002 | N | 0.368 | neutral | None | None | None | None | N |
Q/C | 0.7611 | likely_pathogenic | 0.7305 | pathogenic | 0.091 | Stabilizing | 0.633 | D | 0.233 | neutral | None | None | None | None | N |
Q/D | 0.3811 | ambiguous | 0.3328 | benign | -0.074 | Destabilizing | None | N | 0.089 | neutral | None | None | None | None | N |
Q/E | 0.0592 | likely_benign | 0.0573 | benign | -0.133 | Destabilizing | None | N | 0.093 | neutral | N | 0.367594986 | None | None | N |
Q/F | 0.8168 | likely_pathogenic | 0.8131 | pathogenic | -0.561 | Destabilizing | 0.314 | N | 0.446 | neutral | None | None | None | None | N |
Q/G | 0.2949 | likely_benign | 0.2806 | benign | -0.274 | Destabilizing | 0.004 | N | 0.397 | neutral | None | None | None | None | N |
Q/H | 0.3902 | ambiguous | 0.3588 | ambiguous | -0.216 | Destabilizing | 0.102 | N | 0.362 | neutral | N | 0.509029812 | None | None | N |
Q/I | 0.5428 | ambiguous | 0.5615 | ambiguous | 0.033 | Stabilizing | 0.041 | N | 0.483 | neutral | None | None | None | None | N |
Q/K | 0.1889 | likely_benign | 0.1742 | benign | 0.104 | Stabilizing | 0.004 | N | 0.227 | neutral | N | 0.458139632 | None | None | N |
Q/L | 0.2402 | likely_benign | 0.2333 | benign | 0.033 | Stabilizing | 0.007 | N | 0.349 | neutral | N | 0.49704195 | None | None | N |
Q/M | 0.3942 | ambiguous | 0.3917 | ambiguous | 0.245 | Stabilizing | 0.314 | N | 0.353 | neutral | None | None | None | None | N |
Q/N | 0.334 | likely_benign | 0.313 | benign | -0.159 | Destabilizing | 0.004 | N | 0.248 | neutral | None | None | None | None | N |
Q/P | 0.7266 | likely_pathogenic | 0.7445 | pathogenic | -0.008 | Destabilizing | 0.013 | N | 0.373 | neutral | N | 0.497908742 | None | None | N |
Q/R | 0.2174 | likely_benign | 0.2009 | benign | 0.238 | Stabilizing | 0.003 | N | 0.301 | neutral | N | 0.478706905 | None | None | N |
Q/S | 0.2474 | likely_benign | 0.2315 | benign | -0.134 | Destabilizing | 0.002 | N | 0.231 | neutral | None | None | None | None | N |
Q/T | 0.2813 | likely_benign | 0.2584 | benign | -0.062 | Destabilizing | 0.009 | N | 0.377 | neutral | None | None | None | None | N |
Q/V | 0.3097 | likely_benign | 0.3083 | benign | -0.008 | Destabilizing | 0.009 | N | 0.345 | neutral | None | None | None | None | N |
Q/W | 0.8431 | likely_pathogenic | 0.8219 | pathogenic | -0.599 | Destabilizing | 0.633 | D | 0.272 | neutral | None | None | None | None | N |
Q/Y | 0.6406 | likely_pathogenic | 0.6238 | pathogenic | -0.314 | Destabilizing | 0.115 | N | 0.389 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.