Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22458 | 67597;67598;67599 | chr2:178579825;178579824;178579823 | chr2:179444552;179444551;179444550 |
N2AB | 20817 | 62674;62675;62676 | chr2:178579825;178579824;178579823 | chr2:179444552;179444551;179444550 |
N2A | 19890 | 59893;59894;59895 | chr2:178579825;178579824;178579823 | chr2:179444552;179444551;179444550 |
N2B | 13393 | 40402;40403;40404 | chr2:178579825;178579824;178579823 | chr2:179444552;179444551;179444550 |
Novex-1 | 13518 | 40777;40778;40779 | chr2:178579825;178579824;178579823 | chr2:179444552;179444551;179444550 |
Novex-2 | 13585 | 40978;40979;40980 | chr2:178579825;178579824;178579823 | chr2:179444552;179444551;179444550 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | N | 0.843 | 0.614 | 0.772403177195 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86038E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8529 | likely_pathogenic | 0.8256 | pathogenic | -2.12 | Highly Destabilizing | 0.992 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/C | 0.777 | likely_pathogenic | 0.7542 | pathogenic | -1.395 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/D | 0.9959 | likely_pathogenic | 0.9944 | pathogenic | -1.862 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/E | 0.9818 | likely_pathogenic | 0.974 | pathogenic | -1.721 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
L/F | 0.4368 | ambiguous | 0.4541 | ambiguous | -1.29 | Destabilizing | 0.154 | N | 0.413 | neutral | None | None | None | None | N |
L/G | 0.9605 | likely_pathogenic | 0.9478 | pathogenic | -2.591 | Highly Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
L/H | 0.9549 | likely_pathogenic | 0.9423 | pathogenic | -1.919 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
L/I | 0.1651 | likely_benign | 0.1613 | benign | -0.819 | Destabilizing | 0.983 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/K | 0.9545 | likely_pathogenic | 0.9376 | pathogenic | -1.581 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
L/M | 0.2564 | likely_benign | 0.2377 | benign | -0.697 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.496084356 | None | None | N |
L/N | 0.9729 | likely_pathogenic | 0.9637 | pathogenic | -1.677 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
L/P | 0.9264 | likely_pathogenic | 0.9016 | pathogenic | -1.227 | Destabilizing | 0.999 | D | 0.843 | deleterious | N | 0.47816348 | None | None | N |
L/Q | 0.9265 | likely_pathogenic | 0.9009 | pathogenic | -1.657 | Destabilizing | 0.999 | D | 0.811 | deleterious | N | 0.51207547 | None | None | N |
L/R | 0.9325 | likely_pathogenic | 0.907 | pathogenic | -1.183 | Destabilizing | 0.999 | D | 0.813 | deleterious | D | 0.52359636 | None | None | N |
L/S | 0.9652 | likely_pathogenic | 0.9545 | pathogenic | -2.383 | Highly Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
L/T | 0.8152 | likely_pathogenic | 0.7735 | pathogenic | -2.103 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
L/V | 0.1666 | likely_benign | 0.158 | benign | -1.227 | Destabilizing | 0.978 | D | 0.728 | prob.delet. | N | 0.478755339 | None | None | N |
L/W | 0.8587 | likely_pathogenic | 0.8388 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/Y | 0.9075 | likely_pathogenic | 0.8959 | pathogenic | -1.262 | Destabilizing | 0.99 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.