Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2246367612;67613;67614 chr2:178579810;178579809;178579808chr2:179444537;179444536;179444535
N2AB2082262689;62690;62691 chr2:178579810;178579809;178579808chr2:179444537;179444536;179444535
N2A1989559908;59909;59910 chr2:178579810;178579809;178579808chr2:179444537;179444536;179444535
N2B1339840417;40418;40419 chr2:178579810;178579809;178579808chr2:179444537;179444536;179444535
Novex-11352340792;40793;40794 chr2:178579810;178579809;178579808chr2:179444537;179444536;179444535
Novex-21359040993;40994;40995 chr2:178579810;178579809;178579808chr2:179444537;179444536;179444535
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTA
  • RefSeq wild type template codon: CAT
  • Domain: Fn3-51
  • Domain position: 13
  • Structural Position: 15
  • Q(SASA): 0.3751
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/L rs1162620445 -0.384 None N 0.063 0.099 0.0762999501168 gnomAD-2.1.1 3.19E-05 None None None None N None 1.14705E-04 0 None 0 0 None 0 None 0 0 0
V/L rs1162620445 -0.384 None N 0.063 0.099 0.0762999501168 gnomAD-3.1.2 6.58E-06 None None None None N None 2.41E-05 0 0 0 0 None 0 0 0 0 0
V/L rs1162620445 -0.384 None N 0.063 0.099 0.0762999501168 gnomAD-4.0.0 6.57566E-06 None None None None N None 2.41243E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.2243 likely_benign 0.2043 benign -0.913 Destabilizing 0.052 N 0.373 neutral D 0.522196684 None None N
V/C 0.7262 likely_pathogenic 0.7011 pathogenic -1.134 Destabilizing 0.935 D 0.319 neutral None None None None N
V/D 0.6392 likely_pathogenic 0.6129 pathogenic -1.165 Destabilizing 0.555 D 0.475 neutral None None None None N
V/E 0.5048 ambiguous 0.5066 ambiguous -1.233 Destabilizing 0.484 N 0.433 neutral N 0.510392133 None None N
V/F 0.2364 likely_benign 0.2291 benign -1.313 Destabilizing 0.235 N 0.387 neutral None None None None N
V/G 0.2989 likely_benign 0.2815 benign -1.08 Destabilizing 0.484 N 0.467 neutral N 0.51191307 None None N
V/H 0.7266 likely_pathogenic 0.7038 pathogenic -0.819 Destabilizing 0.935 D 0.414 neutral None None None None N
V/I 0.0858 likely_benign 0.0784 benign -0.585 Destabilizing None N 0.076 neutral N 0.466705974 None None N
V/K 0.5141 ambiguous 0.4868 ambiguous -0.631 Destabilizing 0.555 D 0.433 neutral None None None None N
V/L 0.2333 likely_benign 0.2126 benign -0.585 Destabilizing None N 0.063 neutral N 0.468307819 None None N
V/M 0.206 likely_benign 0.1838 benign -0.494 Destabilizing 0.38 N 0.398 neutral None None None None N
V/N 0.4557 ambiguous 0.3898 ambiguous -0.531 Destabilizing 0.555 D 0.465 neutral None None None None N
V/P 0.7155 likely_pathogenic 0.6817 pathogenic -0.663 Destabilizing 0.791 D 0.441 neutral None None None None N
V/Q 0.4365 ambiguous 0.4395 ambiguous -0.833 Destabilizing 0.791 D 0.413 neutral None None None None N
V/R 0.4272 ambiguous 0.4131 ambiguous -0.213 Destabilizing 0.555 D 0.459 neutral None None None None N
V/S 0.2908 likely_benign 0.251 benign -0.917 Destabilizing 0.081 N 0.433 neutral None None None None N
V/T 0.2122 likely_benign 0.1846 benign -0.891 Destabilizing 0.001 N 0.054 neutral None None None None N
V/W 0.8891 likely_pathogenic 0.8897 pathogenic -1.413 Destabilizing 0.935 D 0.52 neutral None None None None N
V/Y 0.665 likely_pathogenic 0.649 pathogenic -1.02 Destabilizing 0.555 D 0.365 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.