Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22471 | 67636;67637;67638 | chr2:178579786;178579785;178579784 | chr2:179444513;179444512;179444511 |
N2AB | 20830 | 62713;62714;62715 | chr2:178579786;178579785;178579784 | chr2:179444513;179444512;179444511 |
N2A | 19903 | 59932;59933;59934 | chr2:178579786;178579785;178579784 | chr2:179444513;179444512;179444511 |
N2B | 13406 | 40441;40442;40443 | chr2:178579786;178579785;178579784 | chr2:179444513;179444512;179444511 |
Novex-1 | 13531 | 40816;40817;40818 | chr2:178579786;178579785;178579784 | chr2:179444513;179444512;179444511 |
Novex-2 | 13598 | 41017;41018;41019 | chr2:178579786;178579785;178579784 | chr2:179444513;179444512;179444511 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | None | N | 0.228 | 0.128 | 0.107399877778 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77886E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0677 | likely_benign | 0.0675 | benign | -0.602 | Destabilizing | None | N | 0.207 | neutral | N | 0.412428772 | None | None | N |
G/C | 0.1302 | likely_benign | 0.1197 | benign | -0.884 | Destabilizing | 0.78 | D | 0.645 | neutral | N | 0.466705974 | None | None | N |
G/D | 0.2822 | likely_benign | 0.2702 | benign | -2.338 | Highly Destabilizing | 0.117 | N | 0.669 | neutral | N | 0.472207794 | None | None | N |
G/E | 0.2079 | likely_benign | 0.2051 | benign | -2.127 | Highly Destabilizing | 0.081 | N | 0.679 | prob.neutral | None | None | None | None | N |
G/F | 0.3525 | ambiguous | 0.3603 | ambiguous | -0.469 | Destabilizing | 0.555 | D | 0.691 | prob.neutral | None | None | None | None | N |
G/H | 0.3476 | ambiguous | 0.3194 | benign | -2.005 | Highly Destabilizing | 0.824 | D | 0.617 | neutral | None | None | None | None | N |
G/I | 0.1343 | likely_benign | 0.1331 | benign | 0.597 | Stabilizing | 0.081 | N | 0.68 | prob.neutral | None | None | None | None | N |
G/K | 0.5359 | ambiguous | 0.5125 | ambiguous | -1.124 | Destabilizing | 0.081 | N | 0.676 | prob.neutral | None | None | None | None | N |
G/L | 0.2092 | likely_benign | 0.2049 | benign | 0.597 | Stabilizing | 0.081 | N | 0.634 | neutral | None | None | None | None | N |
G/M | 0.2588 | likely_benign | 0.2589 | benign | 0.238 | Stabilizing | 0.824 | D | 0.648 | neutral | None | None | None | None | N |
G/N | 0.2673 | likely_benign | 0.2534 | benign | -1.449 | Destabilizing | 0.081 | N | 0.643 | neutral | None | None | None | None | N |
G/P | 0.9524 | likely_pathogenic | 0.9584 | pathogenic | 0.242 | Stabilizing | 0.38 | N | 0.663 | neutral | None | None | None | None | N |
G/Q | 0.3 | likely_benign | 0.296 | benign | -1.193 | Destabilizing | 0.38 | N | 0.676 | prob.neutral | None | None | None | None | N |
G/R | 0.354 | ambiguous | 0.3527 | ambiguous | -1.366 | Destabilizing | 0.317 | N | 0.656 | neutral | N | 0.43778579 | None | None | N |
G/S | 0.0708 | likely_benign | 0.0679 | benign | -1.719 | Destabilizing | None | N | 0.228 | neutral | N | 0.361071658 | None | None | N |
G/T | 0.0796 | likely_benign | 0.0779 | benign | -1.393 | Destabilizing | 0.002 | N | 0.463 | neutral | None | None | None | None | N |
G/V | 0.1062 | likely_benign | 0.1065 | benign | 0.242 | Stabilizing | None | N | 0.635 | neutral | N | 0.455758262 | None | None | N |
G/W | 0.3372 | likely_benign | 0.3347 | benign | -1.454 | Destabilizing | 0.935 | D | 0.647 | neutral | None | None | None | None | N |
G/Y | 0.321 | likely_benign | 0.3107 | benign | -0.765 | Destabilizing | 0.555 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.