Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22473 | 67642;67643;67644 | chr2:178579780;178579779;178579778 | chr2:179444507;179444506;179444505 |
N2AB | 20832 | 62719;62720;62721 | chr2:178579780;178579779;178579778 | chr2:179444507;179444506;179444505 |
N2A | 19905 | 59938;59939;59940 | chr2:178579780;178579779;178579778 | chr2:179444507;179444506;179444505 |
N2B | 13408 | 40447;40448;40449 | chr2:178579780;178579779;178579778 | chr2:179444507;179444506;179444505 |
Novex-1 | 13533 | 40822;40823;40824 | chr2:178579780;178579779;178579778 | chr2:179444507;179444506;179444505 |
Novex-2 | 13600 | 41023;41024;41025 | chr2:178579780;178579779;178579778 | chr2:179444507;179444506;179444505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1164219894 | 0.178 | 0.996 | N | 0.575 | 0.371 | 0.272639205421 | gnomAD-4.0.0 | 2.05323E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69903E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5532 | ambiguous | 0.5003 | ambiguous | -0.418 | Destabilizing | 0.998 | D | 0.616 | neutral | None | None | None | None | I |
K/C | 0.8208 | likely_pathogenic | 0.7815 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
K/D | 0.7169 | likely_pathogenic | 0.6858 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/E | 0.2567 | likely_benign | 0.2375 | benign | 0.018 | Stabilizing | 0.996 | D | 0.575 | neutral | N | 0.47626682 | None | None | I |
K/F | 0.8989 | likely_pathogenic | 0.8955 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/G | 0.5645 | likely_pathogenic | 0.5042 | ambiguous | -0.768 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/H | 0.4871 | ambiguous | 0.4407 | ambiguous | -0.992 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
K/I | 0.5379 | ambiguous | 0.5458 | ambiguous | 0.481 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.523927481 | None | None | I |
K/L | 0.5056 | ambiguous | 0.466 | ambiguous | 0.481 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/M | 0.3453 | ambiguous | 0.3306 | benign | 0.164 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
K/N | 0.5028 | ambiguous | 0.4763 | ambiguous | -0.415 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.470362355 | None | None | I |
K/P | 0.942 | likely_pathogenic | 0.9224 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
K/Q | 0.1612 | likely_benign | 0.1429 | benign | -0.429 | Destabilizing | 0.999 | D | 0.675 | neutral | N | 0.505032289 | None | None | I |
K/R | 0.096 | likely_benign | 0.0923 | benign | -0.531 | Destabilizing | 0.64 | D | 0.319 | neutral | N | 0.498453033 | None | None | I |
K/S | 0.5627 | ambiguous | 0.5112 | ambiguous | -0.988 | Destabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | I |
K/T | 0.2912 | likely_benign | 0.2549 | benign | -0.679 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.471765077 | None | None | I |
K/V | 0.4833 | ambiguous | 0.463 | ambiguous | 0.212 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
K/W | 0.886 | likely_pathogenic | 0.8726 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
K/Y | 0.7991 | likely_pathogenic | 0.7878 | pathogenic | 0.252 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.