Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22474 | 67645;67646;67647 | chr2:178579777;178579776;178579775 | chr2:179444504;179444503;179444502 |
N2AB | 20833 | 62722;62723;62724 | chr2:178579777;178579776;178579775 | chr2:179444504;179444503;179444502 |
N2A | 19906 | 59941;59942;59943 | chr2:178579777;178579776;178579775 | chr2:179444504;179444503;179444502 |
N2B | 13409 | 40450;40451;40452 | chr2:178579777;178579776;178579775 | chr2:179444504;179444503;179444502 |
Novex-1 | 13534 | 40825;40826;40827 | chr2:178579777;178579776;178579775 | chr2:179444504;179444503;179444502 |
Novex-2 | 13601 | 41026;41027;41028 | chr2:178579777;178579776;178579775 | chr2:179444504;179444503;179444502 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs780089189 | -1.63 | 1.0 | N | 0.723 | 0.342 | 0.221734844693 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs780089189 | -1.63 | 1.0 | N | 0.723 | 0.342 | 0.221734844693 | gnomAD-4.0.0 | 1.36882E-06 | None | None | None | None | N | None | 0 | 4.47387E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.789 | likely_pathogenic | 0.791 | pathogenic | -0.79 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/C | 0.9472 | likely_pathogenic | 0.9393 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
K/D | 0.9503 | likely_pathogenic | 0.9539 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/E | 0.73 | likely_pathogenic | 0.7335 | pathogenic | -0.744 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.482270072 | None | None | N |
K/F | 0.9571 | likely_pathogenic | 0.9624 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/G | 0.9015 | likely_pathogenic | 0.9011 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/H | 0.739 | likely_pathogenic | 0.7163 | pathogenic | -0.889 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/I | 0.7443 | likely_pathogenic | 0.7574 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/L | 0.7166 | likely_pathogenic | 0.7063 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/M | 0.5795 | likely_pathogenic | 0.5793 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.470002886 | None | None | N |
K/N | 0.8845 | likely_pathogenic | 0.8912 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.480763307 | None | None | N |
K/P | 0.6856 | likely_pathogenic | 0.67 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/Q | 0.444 | ambiguous | 0.4233 | ambiguous | -0.881 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.498933036 | None | None | N |
K/R | 0.1419 | likely_benign | 0.1357 | benign | -0.379 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.478480406 | None | None | N |
K/S | 0.8916 | likely_pathogenic | 0.8926 | pathogenic | -1.367 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/T | 0.7064 | likely_pathogenic | 0.7 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.515825286 | None | None | N |
K/V | 0.728 | likely_pathogenic | 0.7351 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
K/W | 0.961 | likely_pathogenic | 0.9608 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/Y | 0.8841 | likely_pathogenic | 0.8853 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.