Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22481 | 67666;67667;67668 | chr2:178579756;178579755;178579754 | chr2:179444483;179444482;179444481 |
N2AB | 20840 | 62743;62744;62745 | chr2:178579756;178579755;178579754 | chr2:179444483;179444482;179444481 |
N2A | 19913 | 59962;59963;59964 | chr2:178579756;178579755;178579754 | chr2:179444483;179444482;179444481 |
N2B | 13416 | 40471;40472;40473 | chr2:178579756;178579755;178579754 | chr2:179444483;179444482;179444481 |
Novex-1 | 13541 | 40846;40847;40848 | chr2:178579756;178579755;178579754 | chr2:179444483;179444482;179444481 |
Novex-2 | 13608 | 41047;41048;41049 | chr2:178579756;178579755;178579754 | chr2:179444483;179444482;179444481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1268356218 | -0.381 | 1.0 | N | 0.811 | 0.61 | 0.358340041657 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/R | rs1268356218 | -0.381 | 1.0 | N | 0.811 | 0.61 | 0.358340041657 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | I | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.242 | likely_benign | 0.2042 | benign | -0.465 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | I |
S/C | 0.2223 | likely_benign | 0.177 | benign | -0.31 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.475006543 | None | None | I |
S/D | 0.9067 | likely_pathogenic | 0.8791 | pathogenic | -0.64 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
S/E | 0.9304 | likely_pathogenic | 0.9104 | pathogenic | -0.708 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | I |
S/F | 0.7704 | likely_pathogenic | 0.6847 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
S/G | 0.2987 | likely_benign | 0.2472 | benign | -0.625 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.463412158 | None | None | I |
S/H | 0.7962 | likely_pathogenic | 0.7256 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
S/I | 0.8067 | likely_pathogenic | 0.7257 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.507478844 | None | None | I |
S/K | 0.9665 | likely_pathogenic | 0.951 | pathogenic | -0.669 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/L | 0.4655 | ambiguous | 0.3689 | ambiguous | -0.163 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
S/M | 0.6596 | likely_pathogenic | 0.5491 | ambiguous | 0.322 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
S/N | 0.5438 | ambiguous | 0.4931 | ambiguous | -0.508 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.496122538 | None | None | I |
S/P | 0.9895 | likely_pathogenic | 0.9847 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
S/Q | 0.8672 | likely_pathogenic | 0.8186 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
S/R | 0.9473 | likely_pathogenic | 0.9267 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.48882793 | None | None | I |
S/T | 0.2364 | likely_benign | 0.1884 | benign | -0.519 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.475296032 | None | None | I |
S/V | 0.7134 | likely_pathogenic | 0.6007 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
S/W | 0.8443 | likely_pathogenic | 0.7917 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
S/Y | 0.7108 | likely_pathogenic | 0.6381 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.