Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22483 | 67672;67673;67674 | chr2:178579750;178579749;178579748 | chr2:179444477;179444476;179444475 |
N2AB | 20842 | 62749;62750;62751 | chr2:178579750;178579749;178579748 | chr2:179444477;179444476;179444475 |
N2A | 19915 | 59968;59969;59970 | chr2:178579750;178579749;178579748 | chr2:179444477;179444476;179444475 |
N2B | 13418 | 40477;40478;40479 | chr2:178579750;178579749;178579748 | chr2:179444477;179444476;179444475 |
Novex-1 | 13543 | 40852;40853;40854 | chr2:178579750;178579749;178579748 | chr2:179444477;179444476;179444475 |
Novex-2 | 13610 | 41053;41054;41055 | chr2:178579750;178579749;178579748 | chr2:179444477;179444476;179444475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1291879446 | -1.522 | 0.198 | N | 0.251 | 0.125 | 0.471211772063 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs1291879446 | -1.522 | 0.198 | N | 0.251 | 0.125 | 0.471211772063 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9662 | likely_pathogenic | 0.9555 | pathogenic | -2.519 | Highly Destabilizing | 0.983 | D | 0.663 | neutral | None | None | None | None | I |
I/C | 0.9625 | likely_pathogenic | 0.9457 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
I/D | 0.991 | likely_pathogenic | 0.9903 | pathogenic | -2.513 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | I |
I/E | 0.9817 | likely_pathogenic | 0.98 | pathogenic | -2.351 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | I |
I/F | 0.8747 | likely_pathogenic | 0.842 | pathogenic | -1.57 | Destabilizing | 0.997 | D | 0.732 | prob.delet. | D | 0.525359743 | None | None | I |
I/G | 0.9882 | likely_pathogenic | 0.9844 | pathogenic | -3.01 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | I |
I/H | 0.9838 | likely_pathogenic | 0.9792 | pathogenic | -2.325 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
I/K | 0.9672 | likely_pathogenic | 0.9607 | pathogenic | -1.937 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
I/L | 0.3408 | ambiguous | 0.2902 | benign | -1.128 | Destabilizing | 0.798 | D | 0.465 | neutral | N | 0.475642108 | None | None | I |
I/M | 0.4488 | ambiguous | 0.3818 | ambiguous | -0.868 | Destabilizing | 0.997 | D | 0.689 | prob.neutral | D | 0.527894639 | None | None | I |
I/N | 0.7324 | likely_pathogenic | 0.7435 | pathogenic | -2.048 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | D | 0.540264902 | None | None | I |
I/P | 0.9501 | likely_pathogenic | 0.937 | pathogenic | -1.569 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
I/Q | 0.9739 | likely_pathogenic | 0.9682 | pathogenic | -2.03 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | I |
I/R | 0.9588 | likely_pathogenic | 0.9527 | pathogenic | -1.464 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | I |
I/S | 0.9482 | likely_pathogenic | 0.9403 | pathogenic | -2.745 | Highly Destabilizing | 0.997 | D | 0.76 | deleterious | D | 0.528148128 | None | None | I |
I/T | 0.9441 | likely_pathogenic | 0.927 | pathogenic | -2.451 | Highly Destabilizing | 0.978 | D | 0.759 | deleterious | N | 0.507575111 | None | None | I |
I/V | 0.1747 | likely_benign | 0.138 | benign | -1.569 | Destabilizing | 0.198 | N | 0.251 | neutral | N | 0.492356567 | None | None | I |
I/W | 0.994 | likely_pathogenic | 0.991 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
I/Y | 0.9655 | likely_pathogenic | 0.9569 | pathogenic | -1.638 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.