Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22487 | 67684;67685;67686 | chr2:178579738;178579737;178579736 | chr2:179444465;179444464;179444463 |
N2AB | 20846 | 62761;62762;62763 | chr2:178579738;178579737;178579736 | chr2:179444465;179444464;179444463 |
N2A | 19919 | 59980;59981;59982 | chr2:178579738;178579737;178579736 | chr2:179444465;179444464;179444463 |
N2B | 13422 | 40489;40490;40491 | chr2:178579738;178579737;178579736 | chr2:179444465;179444464;179444463 |
Novex-1 | 13547 | 40864;40865;40866 | chr2:178579738;178579737;178579736 | chr2:179444465;179444464;179444463 |
Novex-2 | 13614 | 41065;41066;41067 | chr2:178579738;178579737;178579736 | chr2:179444465;179444464;179444463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs879097484 | None | None | N | 0.221 | 0.113 | None | gnomAD-4.0.0 | 2.05323E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87329E-05 | 0 | 8.99672E-07 | 0 | 1.65744E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1984 | likely_benign | 0.1562 | benign | -2.382 | Highly Destabilizing | None | N | 0.221 | neutral | N | 0.510283393 | None | None | N |
V/C | 0.6362 | likely_pathogenic | 0.5334 | ambiguous | -2.083 | Highly Destabilizing | 0.824 | D | 0.617 | neutral | None | None | None | None | N |
V/D | 0.6083 | likely_pathogenic | 0.4834 | ambiguous | -3.236 | Highly Destabilizing | 0.38 | N | 0.695 | prob.neutral | None | None | None | None | N |
V/E | 0.4936 | ambiguous | 0.4084 | ambiguous | -3.091 | Highly Destabilizing | 0.317 | N | 0.67 | neutral | N | 0.520169526 | None | None | N |
V/F | 0.2143 | likely_benign | 0.1691 | benign | -1.433 | Destabilizing | 0.38 | N | 0.7 | prob.neutral | None | None | None | None | N |
V/G | 0.3306 | likely_benign | 0.2469 | benign | -2.81 | Highly Destabilizing | 0.062 | N | 0.696 | prob.neutral | N | 0.491612633 | None | None | N |
V/H | 0.5287 | ambiguous | 0.4229 | ambiguous | -2.216 | Highly Destabilizing | 0.935 | D | 0.64 | neutral | None | None | None | None | N |
V/I | 0.0872 | likely_benign | 0.0834 | benign | -1.203 | Destabilizing | None | N | 0.161 | neutral | N | 0.469591564 | None | None | N |
V/K | 0.4228 | ambiguous | 0.3323 | benign | -1.99 | Destabilizing | 0.38 | N | 0.675 | prob.neutral | None | None | None | None | N |
V/L | 0.2803 | likely_benign | 0.2216 | benign | -1.203 | Destabilizing | None | N | 0.23 | neutral | N | 0.495564657 | None | None | N |
V/M | 0.2009 | likely_benign | 0.1528 | benign | -1.337 | Destabilizing | 0.38 | N | 0.642 | neutral | None | None | None | None | N |
V/N | 0.3923 | ambiguous | 0.2782 | benign | -2.224 | Highly Destabilizing | 0.555 | D | 0.663 | neutral | None | None | None | None | N |
V/P | 0.9785 | likely_pathogenic | 0.961 | pathogenic | -1.571 | Destabilizing | 0.38 | N | 0.655 | neutral | None | None | None | None | N |
V/Q | 0.4107 | ambiguous | 0.3229 | benign | -2.23 | Highly Destabilizing | 0.555 | D | 0.624 | neutral | None | None | None | None | N |
V/R | 0.3113 | likely_benign | 0.2384 | benign | -1.546 | Destabilizing | 0.38 | N | 0.663 | neutral | None | None | None | None | N |
V/S | 0.2604 | likely_benign | 0.1946 | benign | -2.747 | Highly Destabilizing | 0.081 | N | 0.67 | neutral | None | None | None | None | N |
V/T | 0.166 | likely_benign | 0.136 | benign | -2.492 | Highly Destabilizing | 0.002 | N | 0.429 | neutral | None | None | None | None | N |
V/W | 0.7928 | likely_pathogenic | 0.723 | pathogenic | -1.808 | Destabilizing | 0.935 | D | 0.651 | neutral | None | None | None | None | N |
V/Y | 0.5629 | ambiguous | 0.4584 | ambiguous | -1.566 | Destabilizing | 0.555 | D | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.