Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22489 | 67690;67691;67692 | chr2:178579732;178579731;178579730 | chr2:179444459;179444458;179444457 |
N2AB | 20848 | 62767;62768;62769 | chr2:178579732;178579731;178579730 | chr2:179444459;179444458;179444457 |
N2A | 19921 | 59986;59987;59988 | chr2:178579732;178579731;178579730 | chr2:179444459;179444458;179444457 |
N2B | 13424 | 40495;40496;40497 | chr2:178579732;178579731;178579730 | chr2:179444459;179444458;179444457 |
Novex-1 | 13549 | 40870;40871;40872 | chr2:178579732;178579731;178579730 | chr2:179444459;179444458;179444457 |
Novex-2 | 13616 | 41071;41072;41073 | chr2:178579732;178579731;178579730 | chr2:179444459;179444458;179444457 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.998 | N | 0.753 | 0.426 | 0.359963025489 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88288E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5288 | ambiguous | 0.446 | ambiguous | -1.943 | Destabilizing | 0.939 | D | 0.701 | prob.neutral | N | 0.508397881 | None | None | N |
D/C | 0.869 | likely_pathogenic | 0.8283 | pathogenic | -0.87 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
D/E | 0.3119 | likely_benign | 0.2688 | benign | -0.914 | Destabilizing | 0.02 | N | 0.359 | neutral | N | 0.329252815 | None | None | N |
D/F | 0.9144 | likely_pathogenic | 0.8825 | pathogenic | -1.762 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
D/G | 0.6287 | likely_pathogenic | 0.5747 | pathogenic | -2.294 | Highly Destabilizing | 0.939 | D | 0.705 | prob.neutral | N | 0.509611389 | None | None | N |
D/H | 0.5968 | likely_pathogenic | 0.5385 | ambiguous | -1.482 | Destabilizing | 0.998 | D | 0.753 | deleterious | N | 0.495354013 | None | None | N |
D/I | 0.8903 | likely_pathogenic | 0.8409 | pathogenic | -0.942 | Destabilizing | 0.993 | D | 0.808 | deleterious | None | None | None | None | N |
D/K | 0.8816 | likely_pathogenic | 0.862 | pathogenic | -1.627 | Destabilizing | 0.91 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/L | 0.8273 | likely_pathogenic | 0.7765 | pathogenic | -0.942 | Destabilizing | 0.986 | D | 0.773 | deleterious | None | None | None | None | N |
D/M | 0.9357 | likely_pathogenic | 0.9027 | pathogenic | -0.186 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
D/N | 0.3127 | likely_benign | 0.2812 | benign | -1.669 | Destabilizing | 0.939 | D | 0.708 | prob.delet. | N | 0.486542529 | None | None | N |
D/P | 0.9968 | likely_pathogenic | 0.9966 | pathogenic | -1.262 | Destabilizing | 0.993 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/Q | 0.7009 | likely_pathogenic | 0.6372 | pathogenic | -1.391 | Destabilizing | 0.973 | D | 0.754 | deleterious | None | None | None | None | N |
D/R | 0.8728 | likely_pathogenic | 0.852 | pathogenic | -1.471 | Destabilizing | 0.986 | D | 0.714 | prob.delet. | None | None | None | None | N |
D/S | 0.3231 | likely_benign | 0.2828 | benign | -2.38 | Highly Destabilizing | 0.953 | D | 0.661 | neutral | None | None | None | None | N |
D/T | 0.6918 | likely_pathogenic | 0.6109 | pathogenic | -2.034 | Highly Destabilizing | 0.986 | D | 0.728 | prob.delet. | None | None | None | None | N |
D/V | 0.7368 | likely_pathogenic | 0.658 | pathogenic | -1.262 | Destabilizing | 0.991 | D | 0.774 | deleterious | N | 0.501106549 | None | None | N |
D/W | 0.9758 | likely_pathogenic | 0.9697 | pathogenic | -1.831 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
D/Y | 0.5654 | likely_pathogenic | 0.5082 | ambiguous | -1.591 | Destabilizing | 0.997 | D | 0.815 | deleterious | N | 0.471997151 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.