Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22492 | 67699;67700;67701 | chr2:178579723;178579722;178579721 | chr2:179444450;179444449;179444448 |
N2AB | 20851 | 62776;62777;62778 | chr2:178579723;178579722;178579721 | chr2:179444450;179444449;179444448 |
N2A | 19924 | 59995;59996;59997 | chr2:178579723;178579722;178579721 | chr2:179444450;179444449;179444448 |
N2B | 13427 | 40504;40505;40506 | chr2:178579723;178579722;178579721 | chr2:179444450;179444449;179444448 |
Novex-1 | 13552 | 40879;40880;40881 | chr2:178579723;178579722;178579721 | chr2:179444450;179444449;179444448 |
Novex-2 | 13619 | 41080;41081;41082 | chr2:178579723;178579722;178579721 | chr2:179444450;179444449;179444448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1268182721 | -0.665 | 0.029 | N | 0.324 | 0.049 | 0.177238962908 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
T/S | None | None | None | N | 0.106 | 0.097 | 0.0884992946249 | gnomAD-4.0.0 | 2.05322E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1051 | likely_benign | 0.0984 | benign | -0.94 | Destabilizing | 0.005 | N | 0.263 | neutral | N | 0.440674166 | None | None | N |
T/C | 0.4463 | ambiguous | 0.4031 | ambiguous | -0.501 | Destabilizing | 0.356 | N | 0.435 | neutral | None | None | None | None | N |
T/D | 0.3147 | likely_benign | 0.2698 | benign | -0.357 | Destabilizing | 0.016 | N | 0.398 | neutral | None | None | None | None | N |
T/E | 0.3003 | likely_benign | 0.2678 | benign | -0.286 | Destabilizing | None | N | 0.142 | neutral | None | None | None | None | N |
T/F | 0.4067 | ambiguous | 0.3724 | ambiguous | -0.73 | Destabilizing | 0.214 | N | 0.479 | neutral | None | None | None | None | N |
T/G | 0.1779 | likely_benign | 0.1513 | benign | -1.271 | Destabilizing | 0.016 | N | 0.371 | neutral | None | None | None | None | N |
T/H | 0.3151 | likely_benign | 0.2798 | benign | -1.46 | Destabilizing | 0.356 | N | 0.466 | neutral | None | None | None | None | N |
T/I | 0.2897 | likely_benign | 0.2581 | benign | -0.122 | Destabilizing | None | N | 0.178 | neutral | N | 0.457337129 | None | None | N |
T/K | 0.1956 | likely_benign | 0.1808 | benign | -0.754 | Destabilizing | 0.016 | N | 0.391 | neutral | None | None | None | None | N |
T/L | 0.1135 | likely_benign | 0.106 | benign | -0.122 | Destabilizing | 0.007 | N | 0.377 | neutral | None | None | None | None | N |
T/M | 0.1089 | likely_benign | 0.1014 | benign | 0.036 | Stabilizing | 0.214 | N | 0.466 | neutral | None | None | None | None | N |
T/N | 0.1109 | likely_benign | 0.0973 | benign | -0.863 | Destabilizing | 0.029 | N | 0.324 | neutral | N | 0.428379659 | None | None | N |
T/P | 0.1843 | likely_benign | 0.159 | benign | -0.362 | Destabilizing | 0.055 | N | 0.45 | neutral | N | 0.430590458 | None | None | N |
T/Q | 0.2266 | likely_benign | 0.2079 | benign | -0.868 | Destabilizing | 0.072 | N | 0.403 | neutral | None | None | None | None | N |
T/R | 0.1634 | likely_benign | 0.1577 | benign | -0.67 | Destabilizing | 0.072 | N | 0.446 | neutral | None | None | None | None | N |
T/S | 0.1022 | likely_benign | 0.0913 | benign | -1.159 | Destabilizing | None | N | 0.106 | neutral | N | 0.436844427 | None | None | N |
T/V | 0.1891 | likely_benign | 0.1728 | benign | -0.362 | Destabilizing | None | N | 0.086 | neutral | None | None | None | None | N |
T/W | 0.6617 | likely_pathogenic | 0.6273 | pathogenic | -0.73 | Destabilizing | 0.864 | D | 0.443 | neutral | None | None | None | None | N |
T/Y | 0.4128 | ambiguous | 0.3802 | ambiguous | -0.48 | Destabilizing | 0.356 | N | 0.471 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.