Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22495 | 67708;67709;67710 | chr2:178579714;178579713;178579712 | chr2:179444441;179444440;179444439 |
N2AB | 20854 | 62785;62786;62787 | chr2:178579714;178579713;178579712 | chr2:179444441;179444440;179444439 |
N2A | 19927 | 60004;60005;60006 | chr2:178579714;178579713;178579712 | chr2:179444441;179444440;179444439 |
N2B | 13430 | 40513;40514;40515 | chr2:178579714;178579713;178579712 | chr2:179444441;179444440;179444439 |
Novex-1 | 13555 | 40888;40889;40890 | chr2:178579714;178579713;178579712 | chr2:179444441;179444440;179444439 |
Novex-2 | 13622 | 41089;41090;41091 | chr2:178579714;178579713;178579712 | chr2:179444441;179444440;179444439 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.425 | N | 0.321 | 0.136 | 0.110078149338 | gnomAD-4.0.0 | 2.05318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2479 | likely_benign | 0.2062 | benign | -0.256 | Destabilizing | 0.495 | N | 0.374 | neutral | None | None | None | None | N |
N/C | 0.3577 | ambiguous | 0.2995 | benign | 0.347 | Stabilizing | 0.995 | D | 0.275 | neutral | None | None | None | None | N |
N/D | 0.1187 | likely_benign | 0.1096 | benign | 0.244 | Stabilizing | 0.001 | N | 0.099 | neutral | N | 0.368923137 | None | None | N |
N/E | 0.2155 | likely_benign | 0.1974 | benign | 0.219 | Stabilizing | 0.013 | N | 0.127 | neutral | None | None | None | None | N |
N/F | 0.6942 | likely_pathogenic | 0.6419 | pathogenic | -0.604 | Destabilizing | 0.944 | D | 0.295 | neutral | None | None | None | None | N |
N/G | 0.1538 | likely_benign | 0.1415 | benign | -0.437 | Destabilizing | 0.495 | N | 0.328 | neutral | None | None | None | None | N |
N/H | 0.1624 | likely_benign | 0.1417 | benign | -0.438 | Destabilizing | 0.006 | N | 0.295 | neutral | N | 0.467241905 | None | None | N |
N/I | 0.3711 | ambiguous | 0.326 | benign | 0.136 | Stabilizing | 0.927 | D | 0.323 | neutral | N | 0.45823842 | None | None | N |
N/K | 0.1711 | likely_benign | 0.1466 | benign | 0.093 | Stabilizing | 0.27 | N | 0.349 | neutral | N | 0.428299515 | None | None | N |
N/L | 0.3472 | ambiguous | 0.3022 | benign | 0.136 | Stabilizing | 0.704 | D | 0.317 | neutral | None | None | None | None | N |
N/M | 0.3747 | ambiguous | 0.3322 | benign | 0.325 | Stabilizing | 0.981 | D | 0.307 | neutral | None | None | None | None | N |
N/P | 0.746 | likely_pathogenic | 0.679 | pathogenic | 0.032 | Stabilizing | 0.828 | D | 0.331 | neutral | None | None | None | None | N |
N/Q | 0.2398 | likely_benign | 0.2054 | benign | -0.25 | Destabilizing | 0.085 | N | 0.243 | neutral | None | None | None | None | N |
N/R | 0.2551 | likely_benign | 0.2198 | benign | 0.112 | Stabilizing | 0.704 | D | 0.319 | neutral | None | None | None | None | N |
N/S | 0.1053 | likely_benign | 0.0956 | benign | -0.095 | Destabilizing | 0.425 | N | 0.321 | neutral | N | 0.412423198 | None | None | N |
N/T | 0.174 | likely_benign | 0.1492 | benign | 0.025 | Stabilizing | 0.6 | D | 0.306 | neutral | N | 0.430915745 | None | None | N |
N/V | 0.3565 | ambiguous | 0.3093 | benign | 0.032 | Stabilizing | 0.828 | D | 0.313 | neutral | None | None | None | None | N |
N/W | 0.7897 | likely_pathogenic | 0.7384 | pathogenic | -0.624 | Destabilizing | 0.995 | D | 0.265 | neutral | None | None | None | None | N |
N/Y | 0.2099 | likely_benign | 0.1919 | benign | -0.346 | Destabilizing | 0.863 | D | 0.329 | neutral | N | 0.464260315 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.