Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22506 | 67741;67742;67743 | chr2:178579681;178579680;178579679 | chr2:179444408;179444407;179444406 |
N2AB | 20865 | 62818;62819;62820 | chr2:178579681;178579680;178579679 | chr2:179444408;179444407;179444406 |
N2A | 19938 | 60037;60038;60039 | chr2:178579681;178579680;178579679 | chr2:179444408;179444407;179444406 |
N2B | 13441 | 40546;40547;40548 | chr2:178579681;178579680;178579679 | chr2:179444408;179444407;179444406 |
Novex-1 | 13566 | 40921;40922;40923 | chr2:178579681;178579680;178579679 | chr2:179444408;179444407;179444406 |
Novex-2 | 13633 | 41122;41123;41124 | chr2:178579681;178579680;178579679 | chr2:179444408;179444407;179444406 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.773 | N | 0.591 | 0.338 | 0.561523483268 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86015E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.305 | likely_benign | 0.2665 | benign | -1.853 | Destabilizing | 0.008 | N | 0.284 | neutral | None | None | None | None | N |
L/C | 0.4309 | ambiguous | 0.4018 | ambiguous | -1.083 | Destabilizing | 0.981 | D | 0.512 | neutral | None | None | None | None | N |
L/D | 0.7416 | likely_pathogenic | 0.7145 | pathogenic | -1.591 | Destabilizing | 0.69 | D | 0.592 | neutral | None | None | None | None | N |
L/E | 0.4087 | ambiguous | 0.3526 | ambiguous | -1.45 | Destabilizing | 0.388 | N | 0.553 | neutral | None | None | None | None | N |
L/F | 0.1862 | likely_benign | 0.2083 | benign | -1.093 | Destabilizing | 0.69 | D | 0.482 | neutral | None | None | None | None | N |
L/G | 0.4363 | ambiguous | 0.4032 | ambiguous | -2.292 | Highly Destabilizing | 0.388 | N | 0.528 | neutral | None | None | None | None | N |
L/H | 0.2841 | likely_benign | 0.2795 | benign | -1.452 | Destabilizing | 0.981 | D | 0.584 | neutral | None | None | None | None | N |
L/I | 0.1632 | likely_benign | 0.1761 | benign | -0.647 | Destabilizing | 0.193 | N | 0.417 | neutral | N | 0.484483658 | None | None | N |
L/K | 0.2989 | likely_benign | 0.2612 | benign | -1.264 | Destabilizing | 0.388 | N | 0.534 | neutral | None | None | None | None | N |
L/M | 0.11 | likely_benign | 0.1061 | benign | -0.567 | Destabilizing | 0.008 | N | 0.309 | neutral | None | None | None | None | N |
L/N | 0.3431 | ambiguous | 0.2943 | benign | -1.421 | Destabilizing | 0.69 | D | 0.592 | neutral | None | None | None | None | N |
L/P | 0.1948 | likely_benign | 0.1691 | benign | -1.024 | Destabilizing | 0.773 | D | 0.591 | neutral | N | 0.443655756 | None | None | N |
L/Q | 0.1494 | likely_benign | 0.1241 | benign | -1.407 | Destabilizing | 0.773 | D | 0.574 | neutral | N | 0.476709537 | None | None | N |
L/R | 0.2268 | likely_benign | 0.2251 | benign | -0.862 | Destabilizing | 0.627 | D | 0.592 | neutral | N | 0.4099859 | None | None | N |
L/S | 0.2739 | likely_benign | 0.2568 | benign | -2.086 | Highly Destabilizing | 0.024 | N | 0.482 | neutral | None | None | None | None | N |
L/T | 0.1739 | likely_benign | 0.1499 | benign | -1.806 | Destabilizing | 0.004 | N | 0.281 | neutral | None | None | None | None | N |
L/V | 0.1268 | likely_benign | 0.129 | benign | -1.024 | Destabilizing | 0.09 | N | 0.429 | neutral | N | 0.483963583 | None | None | N |
L/W | 0.3353 | likely_benign | 0.411 | ambiguous | -1.314 | Destabilizing | 0.981 | D | 0.594 | neutral | None | None | None | None | N |
L/Y | 0.4072 | ambiguous | 0.4291 | ambiguous | -1.003 | Destabilizing | 0.818 | D | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.